Information on SUBCLASS 4.3.1 |
Subclass Accession number: 277
Subclass: 4.3.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 12.3 +/- 13.0 Average RMSD (Å) : 0.947 +/- 0.277 Consensus geometry
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Consensus Sequence: | pXcXphXX |
(φψ)-conformation: | aalpppbb |
Pattern: | [AFILMTV] | x | [adenpq] | x | [afgilmvy] | [adknqrst] | [aekqst] | x | [DGKNS] | x | [adeknrst] | [afilvy] | x | x | x |
Conservation: | 1.205 | -0.586 | -0.329 | -0.734 | -0.084 | -0.113 | 0.404 | -0.345 | 2.746 | -1.101 | 0.335 | 0.226 | -0.917 | -0.707 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ayx_*_363 | 1ayx | - | 376 | 390 | LAYDAKSASNDITIN | HHHHHHHHT--EEEE | aaaaaaaalxxbbbx |
1cfz_A_138 | 1cfz | A | 145 | 158 | VLAALRESGVEAIP. | HHHHHHTTT---EE. | aaaaaaaavbbxbp. |
1cg2_A_330 | 1cg2 | A | 340 | 354 | AVAYYKEAGGTLGVE | HHHHHHHTT---EEE | aaaaaaaavbbbxbb |
1di2_A_113 | 1di2 | A | 117 | 131 | LQELAVQKGWRLPEY | HHHHHHHHT----EE | aaaaaaaavxxxpbb |
1edq_A_331 | 1edq | A | 346 | 360 | LDQLSVETGRKYELT | HHHHHHHHT---EEE | aaaaaaaavxxbbbb |
1hkk_A_151 | 1hkk | A | 166 | 180 | FQQEAQTSGKERLLL | HHHHHHHH-S---EE | aaaaaaaavxxxxxb |
1k3y_A_17 | 1k3y | A | 19 | 33 | TRWLLAAAGVEFEEK | HHHHHHHHT---EEE | aaaaaaaavxxbbbb |
1kfw_A_210 | 1kfw | A | 225 | 239 | LDAYGSTNNKKYVLS | HHHHHHHTT---EEE | aaaaaaaalbbxbbb |
1kp8_A_282 | 1kp8 | A | 289 | 302 | LQDIATLTGGTVIS. | HHHHHHHHT---EE. | aaaaaaaavbbxbb. |
1kw3_B_69 | 1kw3 | B | 75 | 88 | MADKLRQAGVAFTR. | HHHHHHHHT---EE. | aaaaaaaavxxbbx. |
1okk_D_266 | 1okk | D | 266 | 280 | LIPIVRTLKVPIKFV | HHHHHHHH---EEEE | aaaaaaaavxxxabb |
1tfe_*_169 | 1tfe | - | 173 | 187 | IQQAIAKIGENIVVR | HHHHHHHH-S--EEE | aaaaaaaavbxbbxa |
1vhw_A_132 | 1vhw | A | 138 | 152 | AEEAAKARGIDVKVG | HHHHHHHTT---EEE | aaaaaaaavbxxbbb |
1vjf_A_4 | 1vjf | A | 7 | 21 | LFAFFDAHGVDHKTL | HHHHHHHHT---EEE | aaaaaaaavxxbbbb |
6mht_A_131 | 6mht | A | 136 | 150 | VKNTMNELDYSFHAK | HHHHHHHTTB--EEE | aaaaaaaavbxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ayx_*_363 | 1ayx | * | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | L - 364 |
1hkk_A_151 | 1hkk | A | AMIALLOSAMIZOLINE | A - 183 |
1hkk_A_151 | 1hkk | A | AMIALLOSAMIZOLINE | P - 185 |
1k3y_A_17 | 1k3y | A | GOLGLYCEROL | S - 18 |
1kfw_A_210 | 1kfw | A | GOLGLYCEROL | F - 241 |
1okk_D_266 | 1okk | D | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | V - 280 |
1okk_D_266 | 1okk | D | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | G - 281 |
1vjf_A_4 | 1vjf | A | MSESELENOMETHIONINE | D - 6 |
1vjf_A_4 | 1vjf | A | MSESELENOMETHIONINE | K - 19 |
1vjf_A_4 | 1vjf | A | MSESELENOMETHIONINE | T - 20 |
1vjf_A_4 | 1vjf | A | MSESELENOMETHIONINE | L - 21 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hkk_A_151 | 1hkk | A | AC3AMI BINDING SITE FOR CHAIN A | A - 183 |
Clusters included in this Subclass |
CLUSTER: HE.3.59 |
CLUSTER: HE.4.103 |
CLUSTER: HE.4.60 |
CLUSTER: HE.5.100 |