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Information on SUBCLASS 4.3.1
Subclass Accession number: 277
Subclass: 4.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 12.3 +/- 13.0
Average RMSD (Å) : 0.947 +/- 0.277

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXcXphXX
(φψ)-conformation: aalpppbb
Pattern: [AFILMTV]x[adenpq]x[afgilmvy][adknqrst][aekqst]x[DGKNS]x[adeknrst][afilvy]xxx
Conservation:1.205-0.586-0.329-0.734-0.084-0.1130.404-0.3452.746-1.1010.3350.226-0.917-0.707-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayx_*_3631ayx   -376390LAYDAKSASNDITINHHHHHHHHT--EEEEaaaaaaaalxxbbbx
1cfz_A_1381cfz   A145158VLAALRESGVEAIP.HHHHHHTTT---EE.aaaaaaaavbbxbp.
1cg2_A_3301cg2   A340354AVAYYKEAGGTLGVEHHHHHHHTT---EEEaaaaaaaavbbbxbb
1di2_A_1131di2   A117131LQELAVQKGWRLPEYHHHHHHHHT----EEaaaaaaaavxxxpbb
1edq_A_3311edq   A346360LDQLSVETGRKYELTHHHHHHHHT---EEEaaaaaaaavxxbbbb
1hkk_A_1511hkk   A166180FQQEAQTSGKERLLLHHHHHHHH-S---EEaaaaaaaavxxxxxb
1k3y_A_171k3y   A1933TRWLLAAAGVEFEEKHHHHHHHHT---EEEaaaaaaaavxxbbbb
1kfw_A_2101kfw   A225239LDAYGSTNNKKYVLSHHHHHHHTT---EEEaaaaaaaalbbxbbb
1kp8_A_2821kp8   A289302LQDIATLTGGTVIS.HHHHHHHHT---EE.aaaaaaaavbbxbb.
1kw3_B_691kw3   B7588MADKLRQAGVAFTR.HHHHHHHHT---EE.aaaaaaaavxxbbx.
1okk_D_2661okk   D266280LIPIVRTLKVPIKFVHHHHHHHH---EEEEaaaaaaaavxxxabb
1tfe_*_1691tfe   -173187IQQAIAKIGENIVVRHHHHHHHH-S--EEEaaaaaaaavbxbbxa
1vhw_A_1321vhw   A138152AEEAAKARGIDVKVGHHHHHHHTT---EEEaaaaaaaavbxxbbb
1vjf_A_41vjf   A721LFAFFDAHGVDHKTLHHHHHHHHT---EEEaaaaaaaavxxbbbb
6mht_A_1316mht   A136150VKNTMNELDYSFHAKHHHHHHHTTB--EEEaaaaaaaavbxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayx_*_3631ayx   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 364
1hkk_A_1511hkk   A     AMIALLOSAMIZOLINE A - 183
1hkk_A_1511hkk   A     AMIALLOSAMIZOLINE P - 185
1k3y_A_171k3y   A     GOLGLYCEROL S - 18
1kfw_A_2101kfw   A     GOLGLYCEROL F - 241
1okk_D_2661okk   D     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER V - 280
1okk_D_2661okk   D     GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER G - 281
1vjf_A_41vjf   A     MSESELENOMETHIONINE D - 6
1vjf_A_41vjf   A     MSESELENOMETHIONINE K - 19
1vjf_A_41vjf   A     MSESELENOMETHIONINE T - 20
1vjf_A_41vjf   A     MSESELENOMETHIONINE L - 21
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hkk_A_1511hkk   A AC3AMI BINDING SITE FOR CHAIN AA - 183

Clusters included in this Subclass
CLUSTER: HE.3.59
CLUSTER: HE.4.103
CLUSTER: HE.4.60
CLUSTER: HE.5.100