Information on SUBCLASS 4.7.2 |
Subclass Accession number: 8444
Subclass: 4.7.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 20.0 +/- 22.8 Average RMSD (Å) : 1.275 +/- 0.205 Consensus geometry
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Consensus Sequence: | XXXXXhXh |
(φψ)-conformation: | aababpbb |
Pattern: | [aflvy] | [FILV] | [der] | [enrst] | [AILV] | [KR] | [ANPQS] | x | [flt] | [ADS] | x | [AIPV] | x | [afi] | [ailtv] |
Conservation: | -0.642 | 1.011 | 0.215 | -0.338 | 0.402 | 2.940 | -0.249 | -1.105 | -0.561 | 0.538 | -0.727 | 0.270 | -0.525 | -0.818 | -0.412 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bxo_A_140 | 1bxo | A | 140 | 154 | FFDTVKSSLAQPLFA | HHHHHGGGBSSSEEE | aaaaaaaaxabxbbb |
1e4e_A_190 | 1e4e | A | 193 | 207 | AIESARQYDSKILIE | HHHHHTTT-SSEEEE | aaaaaaaababbbbb |
1g63_A_18 | 1g63 | A | 21 | 35 | YIVELKQHFDEVNIL | HHHHHTTTSS-EEEE | aaaaaaaababbbbb |
1ibq_A_139 | 1ibq | A | 139 | 153 | FFDTVKSQLDSPLFA | HHHHHGGGSSSSEEE | aaaaaaaaxabxbbb |
1oew_A_143 | 1oew | A | 143 | 157 | FFDNAKASLDSPVFT | HHHHHTTTSSSSEEE | aaaaaaaaxabxbbb |
1rpx_C_57 | 1rpx | C | 59 | 73 | VVDSLRPITDLPLDV | HHHHHGGG--S-EEE | aaaaaaaabaxxxxb |
1ujp_A_191 | 1ujp | A | 193 | 207 | LVRRIKARTALPVAV | HHHHHHTT--S-EEE | aaaaaaaabaxxbbb |
1zpd_A_123 | 1zpd | A | 124 | 138 | QLEMAKNITAAAEAI | HHHHHGGG-S-EEEE | aaaaaaaababbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bxo_A_140 | 1bxo | A | MANALPHA-D-MANNOSE | A - 149 |
1bxo_A_140 | 1bxo | A | MANALPHA-D-MANNOSE | Q - 150 |
1e4e_A_190 | 1e4e | A | GOLGLYCEROL | E - 195 |
1e4e_A_190 | 1e4e | A | GOLGLYCEROL | S - 196 |
1e4e_A_190 | 1e4e | A | GOLGLYCEROL | R - 198 |
1e4e_A_190 | 1e4e | A | GOLGLYCEROL | Q - 199 |
1e4e_A_190 | 1e4e | A | ADPADENOSINE-5'-DIPHOSPHATE | E - 207 |
1e4e_A_190 | 1e4e | A | ADPADENOSINE-5'-DIPHOSPHATE | Q - 208 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | Q - 146 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | L - 147 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | D - 148 |
1ujp_A_191 | 1ujp | A | CITCITRIC ACID | V - 207 |
1ujp_A_191 | 1ujp | A | CITCITRIC ACID | G - 208 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4e_A_190 | 1e4e | A | AC3ADP BINDING SITE FOR CHAIN A | Q - 208 |
Clusters included in this Subclass |
CLUSTER: HE.7.11 |