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Information on SUBCLASS 5.12.1
Subclass Accession number: 371
Subclass: 5.12.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>75 %)  2.1.1 (>75 %)  22 (>75 %)  3 (>75 %)  4 (>75 %)  
GO : GO:0003677 (>75 %)  GO:0005489 (>75 %)  GO:0005506 (>75 %)  GO:0008168 (>75 %)  GO:0016741 (>75 %)  GO:0046914 (>75 %)  
SCOP : 52128 (>75 %)  52129 (>75 %)  52130 (>75 %)  54861 (>75 %)  54862 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 15.6 +/- 16.5
Average RMSD (Å) : 1.150 +/- 0.259

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXhXXhpXh
(φψ)-conformation: aappplpbb
Pattern: x[EHKQT][dgv][AFLY]x[DEKRSW]x[flt][AEK][gnv][ALMV][KPR]x[gq][EGS]x[FILV][dstv]
Conservation:-1.1990.629-0.9550.406-1.326-0.632-1.076-0.2020.7700.2341.0111.462-1.0280.6831.030-0.8741.761-0.694
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ajs_A_1701ajs   A170187LQGFLSDLENAPEFSIFVHHHHHHHHHHS-TT-EEEaaaaaaaaaaxppvpxbx
1d7y_A_1321d7y   A132149LEDARRIQAGLRPQSRLLHHHHHHHHHH--TT-EEEaaaaaaaaaaxxxvxbbb
1mgt_A_911mgt   A94111KKVYEWLTKNVKRGSVITHHHHHHHHHHS-TT--EEaaaaaaaaaaxxpvbbbx
1nw3_A_2471nw3   A250267DHQLKERFANMKEGGRIVHHHHHHHHTT--TT-EEEaaaaaaaaaaxxpvxbbb
1odo_A_1081odo   A122139VTGLVDRLAELPAGEPVDHHHHHHHHHHS-TTS-EEaaaaaaaaaaxpxvxxbx
1qnt_A_941qnt   A96113RQVLWKLLKVVKFGEVISHHHHHHHHHH--TT--EEaaaaaaaaaaxxxvbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ajs_A_1701ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID H - 189
1nw3_A_2471nw3   A     SAMS-ADENOSYLMETHIONINE V - 249

Clusters included in this Subclass
CLUSTER: HE.5.174
CLUSTER: HE.6.48