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Information on SUBCLASS 5.2.5
Subclass Accession number: 5749
Subclass: 5.2.5 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)  1.1.1.373.2 (>50 %)  3.2.2 (>50 %)  3.2.2.22
GO : GO:0016614 (>50 %)  GO:0016615 (>50 %)  GO:0016616 (>50 %)  GO:0030060 (>50 %)  
SCOP : 51734 (>50 %)  51735 (>50 %)  51848 (>50 %)  56370 (>50 %)  56371 (>50 %)  56372 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 21.7 +/- 18.4
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpPhhpXh
(φψ)-conformation: aapaapabb
Pattern: [GV][QSW][APQ]x[AGS][KL]x[LM][AKL][AKN][DES][P][FL][LMV][DKS]x[LV][TV][L]x
Conservation:-0.271-0.531-0.531-0.894-0.096-0.387-0.3870.835-0.894-0.6040.1223.3150.3300.267-0.314-0.9670.4390.2521.356-1.039
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g5t_A_981g5t   A108127VWQHGKRMLADPLLDMVVLDHHHHHHHHTT-TT-SEEEEEaaaaaaaaaaxaaxabbbbx
1hye_A_111hye   A1332GSATALLLAKEPFMKDLVLIHHHHHHHHHT-TT--EEEEEaaaaaaaaaaxaaxabbbbb
1mld_A_131mld   A1332GQPLSLLLKNSPLVSRLTLYHHHHHHHHHT-TT-SEEEEEaaaaaaaaaaxaababbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g5t_A_981g5t   A     MGMAGNESIUM ION D - 127
1g5t_A_981g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 127
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 11
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 12
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 13
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 32
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 33

Clusters included in this Subclass
CLUSTER: HE.7.150