ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.27.2

Subclass Accession number: 5805
Subclass: 5.27.2

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7 (>50 %)  2.7.2 (>50 %)  2.7.2.3
GO : GO:0004618 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016774 (>75 %)
SCOP : 53747 (>75 %)  53748 (>75 %)  53749 (>75 %)

Number of loops: 3

Average sequence ID (%) : 52.0 +/- 4.3
Average RMSD (Å) : 0.667 +/- 0.208

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	XpNPppPhX
(φψ)-conformation:	aabppbwbb

Pattern:	[F]	[L]	[LM]	[E]	[K]	[E]	[IL]	[EK]	[FVY]	[FL]	[GS]	[K]	[AV]	[LT]	[ESY]	[N]	[P]	[DET]	[KR]	[P]	[FY]	[LTV]	[AV]	[IV]	[IL]
Conservation:	1.343	0.195	-0.134	0.769	0.769	0.769	-0.367	-0.320	-0.889	-0.722	-0.555	0.769	-0.929	-1.105	-1.590	1.343	1.917	-1.080	-0.074	1.917	0.605	-1.271	-0.929	-0.086	-0.349

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1php_*_169	1php	-	169	193	FLMEKELEVLGKALSNPDRPFTAII	HHHHHHHHHHHHHHHS--SSEEEEE	aaaaaaaaaaaaaaabxxbwbbbbb
1qpg_*_185	1qpg	-	185	209	FLLEKELKYFGKALENPTRPFLAIL	HHHHHHHHHHHHHHSS--SSEEEEE	aaaaaaaaaaaaaaabxxxwxbbxb
1vpe_*_169	1vpe	-	169	193	FLMEKEIKFLSKVTYNPEKPYVVVL	HHHHHHHHHHHHHHH---SSEEEEE	aaaaaaaaaaaaaaabxxbwbbbbb

Clusters included in this Subclass