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Information on SUBCLASS 5.28.1
Subclass Accession number: 5806
Subclass: 5.28.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 18.5 +/- 24.7
Average RMSD (Å) : 0.767 +/- 0.289

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXcXXXhhX
(φψ)-conformation: aalbbppbb
Pattern: [LP][KST][DKQ][IT][ER][DQT][IL][AF][IKV][DKS][AKS][GN]x[EGK][FH][MP][VW]x
Conservation:-0.871-0.367-0.106-0.1080.891-0.6291.4500.038-1.020-0.498-0.4981.688-1.673-0.8901.3030.1281.683-0.520
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f1z_A_871f1z   A87104PSDTRQIAIDSGIKHPVIHHHHHHHHHHHT----EEaaaaaaaaaaavbxpwbb
1n16_A_2461n16   A257274LKKIEDIFVKAGRGFMWNHHHHHHHHHHTT--B-EEaaaaaaaaaaavbbxxbb
1qh4_A_2461qh4   A257274LTQIETLFKSKNYEFMWNHHHHHHHHHHTT--B-EEaaaaaaaaaaavbbxxbb

Clusters included in this Subclass
CLUSTER: HE.6.237