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Information on SUBCLASS 5.29.1
Subclass Accession number: 5807
Subclass: 5.29.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 35.4 +/- 21.2
Average RMSD (Å) : 0.367 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: pppXpDhXh
(φψ)-conformation: aappaalbb
Pattern: [LM][AG][MQ][L][LY][EQ][EKN][EH][HKQ]x[EQ][D][FG][FR][LV][RY]
Conservation:0.433-0.068-0.1970.934-0.1860.634-0.6430.924-0.643-1.7820.5712.511-0.755-1.082-0.218-0.431
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eo6_A_911eo6   A91106MGQLYEKEKDEDGFLYHHHHHHHH--TTS-EEaaaaaaaapxaavbbb
1gnu_A_911gnu   A91106MGQLYQEHHEEDFFLYHHHHHHHH--TTS-EEaaaaaaaaxxaavbbb
1set_A_3861set   A388403LAMLLENHQLQDGRVRHHHHHHHHB-TTS-EEaaaaaaaapbaavxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1set_A_3861set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE R - 386
1set_A_3861set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE I - 387
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gnu_A_911gnu   A NINI BINDING SITE FOR CHAIN AH - 99

Clusters included in this Subclass
CLUSTER: HE.5.398