Information on SUBCLASS 5.4.1 |
Subclass Accession number: 5757
Subclass: 5.4.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 40 Average sequence ID (%) : 21.6 +/- 20.3 Average RMSD (Å) : 0.760 +/- 0.311 Consensus geometry
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Consensus Sequence: | XXhpXGpXh |
(φψ)-conformation: | aabbpgpbb |
Pattern: | [afgilmpvy] | x | [aeknqrst] | x | [acfilmtv] | [dehknpqrst] | x | [dgn] | [adeqst] | x | [agilptv] | [afilpv] | x |
Conservation: | -0.241 | -0.910 | -0.386 | -0.987 | 0.267 | 0.105 | -0.435 | 2.699 | 0.968 | -0.992 | 0.499 | -0.077 | -0.510 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8h_*_317 | 1a8h | - | 324 | 335 | LLREIPYGQDTP. | HHHHS-TTS-EE. | aaaabxxgbxbx. |
1afw_A_380 | 1afw | A | 388 | 400 | ILRELKKDQIGVV | HHHHS-TT-EEEE | aaaabbpvxbbbb |
1az9_*_5 | 1az9 | - | 15 | 27 | LVEQMQPGSAALI | HHHTS-SSEEEEE | aaaaxxxvbbbbb |
1b5p_A_99 | 1b5p | A | 108 | 120 | FQAILDPGDEVIV | HHHH--TT-EEEE | aaaabbpgxbbxb |
1bt4_A_76 | 1bt4 | A | 85 | 97 | PMNFLKEGQTANY | HHHH--TT-EEEE | aaaaxbxgbbxxb |
1bw0_A_112 | 1bw0 | A | 121 | 133 | ITAICDAGDYALV | HHHH--TT-EEEE | aaaabbpgxbbxb |
1c7g_A_99 | 1c7g | A | 107 | 119 | SQLAIKPGQYVAG | HHHH--TTEEEEE | aaaabbpvxbbbb |
1c7n_A_98 | 1c7n | A | 106 | 118 | VREFTKPGDGVII | HHHH--TT-EEEE | aaaabbpgxxbxb |
1c9h_A_57 | 1c9h | A | 62 | 74 | GAAQMSLGQRAKL | HHHT--TT-EEEE | aaaabxpvxbbxb |
1cl1_A_86 | 1cl1 | A | 94 | 106 | ILAFIEQGDHVLM | HHHH--TT-EEEE | aaaaxbpvxbbbb |
1cs1_A_76 | 1cs1 | A | 84 | 96 | TTVFLKPGDLLVA | HHHH--TT-EEEE | aaaabbpgxbbbb |
1d2f_A_96 | 1d2f | A | 104 | 116 | IRQWSETGEGVVI | HHHSS-TT-EEEE | aaaabbpgxbbxb |
1dfo_A_98 | 1dfo | A | 106 | 118 | YTALLEPGDTVLG | HHHH--TT-EEEE | aaaabbpvxxbbb |
1dxy_*_217 | 1dxy | - | 219 | 231 | AFNLMKPGAIVIN | HHHHS-TTEEEEE | aaaapxxvxbbbb |
1e5e_A_86 | 1e5e | A | 94 | 106 | VLTILKAGDHLIS | HHHH--TT-EEEE | aaaaxbpgxbbbb |
1g60_A_199 | 1g60 | A | 206 | 218 | IRASSNPNDLVLD | HHHH--TT-EEEE | aaaabbpvxbbbb |
1gc0_A_89 | 1gc0 | A | 97 | 109 | LWTLLRPGDEVLL | HHHH--TT-EEEE | aaaabbpgxbbxb |
1h2b_A_169 | 1h2b | A | 180 | 192 | AARTLYPGAYVAI | HHTT--TT-EEEE | aaaaxbxgxbbxb |
1in4_A_90 | 1in4 | A | 96 | 108 | ILTSLERGDVLFI | HHHH--TT-EEEE | aaaaxbpvxbbxb |
1iug_A_60 | 1iug | A | 68 | 80 | VKNLFAPGERVLV | HHHH--TT-EEEE | aaaabxpvxxbbb |
1j32_A_98 | 1j32 | A | 107 | 119 | MLAMIEPGDEVII | HHHH--TT-EEEE | aaaabbpgxbbxb |
1j4a_A_219 | 1j4a | A | 221 | 233 | SIAKMKQDVVIVN | HHHHS-TTEEEEE | aaaaxxpvxbbbb |
1jf9_A_94 | 1jf9 | A | 106 | 118 | GNSNVRAGDNIII | HHHH--TT-EEEE | aaaabbpvxbbbb |
1jgt_A_219 | 1jgt | A | 234 | 246 | VAQRVTPGDTPLV | HHHHS-TT---EE | aaaabxpgxxxbb |
1jx6_A_180 | 1jx6 | A | 191 | 203 | FGKFFPKHTYYSV | HHHHS-TT-EEEE | aaaabxpvxxbbb |
1kl1_A_94 | 1kl1 | A | 102 | 114 | YFTVLEHGDTVLG | HHHH--TT-EEEE | aaaabbpvxxbbb |
1m6s_A_58 | 1m6s | A | 66 | 78 | IMAHTQRGDEVIL | HHHH--TT-EEEE | aaaabbpvxbbxb |
1m7y_A_119 | 1m7y | A | 128 | 140 | IFCLADPGEAVLI | HHHH--TT-EEEE | aaaabxpvxbbxb |
1mgp_A_234 | 1mgp | A | 245 | 257 | LREDTPEGSKLRV | HHTTS-TT-EEEE | aaaabpxvxxbbb |
1nw6_A_229 | 1nw6 | A | 236 | 248 | VRALSHPGSTVLD | HHHHS-TT-EEEE | aaaabxpvxxbbb |
1o4s_A_97 | 1o4s | A | 106 | 118 | FMALLDPGDEVIV | HHHH--TT-EEEE | aaaaxxpvxbbxb |
1poi_A_7 | 1poi | A | 11 | 23 | IAKYVHSGDHIAL | HHHH--TT-EEEE | aaaabbxgpxbbb |
1qis_A_170 | 1qis | A | 176 | 188 | SLNEAQAGDVVLF | HHTT--TT-EEEE | aaaaxxxgxxbxb |
1qnt_A_94 | 1qnt | A | 102 | 113 | LLKVVKFGEVIS. | HHHH--TT--EE. | aaaaxxxvbbbx. |
1qpb_A_367 | 1qpb | A | 374 | 386 | LGNFLQEGDVVIA | HHHH--TT-EEEE | aaaaxbxgpbbbb |
1ri5_A_44 | 1ri5 | A | 58 | 70 | IRLYTKRGDSVLD | HHHH--TT-EEEE | aaaabbpvxxbbx |
1tpl_A_99 | 1tpl | A | 107 | 119 | SQLAIKPGQYVAG | HHHH--TT-EEEE | aaaabxpvxbbbb |
1ufk_A_105 | 1ufk | A | 114 | 126 | LARHLRPGDKVLD | HHHH--TT-EEEE | aaaaxbpvxxbbb |
1vjo_A_88 | 1vjo | A | 90 | 102 | IANAVEPGDVVLI | HHHH--TT-EEEE | aaaabbpvxxbbb |
1zym_A_208 | 1zym | A | 208 | 220 | VTSQVKNDDYLIL | HHHH--TT-EEEE | aaaabbpvxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1afw_A_380 | 1afw | A | AVAACTIVE SITE IN CHAIN A. | C - 403 |
Clusters included in this Subclass |
CLUSTER: HE.5.10 |
CLUSTER: HE.6.2 |
CLUSTER: HE.6.282 |
CLUSTER: HE.7.204 |