Information on SUBCLASS 5.46.1 |
Subclass Accession number: 8624
Subclass: 5.46.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 30.7 +/- 24.2 Average RMSD (Å) : 0.633 +/- 0.231 Consensus geometry
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Consensus Sequence: | pLXhXXPhX |
(φψ)-conformation: | aallabwbb |
Pattern: | [AGQ] | [EY] | [V] | x | [AQ] | [AT] | [IV] | [QTY] | x | [ITV] | [MR] | [EQ] | [KR] | [L] | [AEK] | [FGY] | [CKR] | [NV] | [P] | [LY] | x | [GL] | [FV] | [AW] | [GQ] |
Conservation: | -0.824 | -0.181 | 1.216 | -0.900 | -0.318 | 0.129 | 0.886 | -0.824 | -1.127 | -0.220 | -0.084 | 0.971 | 0.971 | 1.216 | -0.598 | -0.522 | -0.673 | -0.627 | 3.256 | 0.266 | -0.861 | -1.191 | -0.201 | 0.540 | -0.298 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hrk_A_276 | 1hrk | A | 278 | 302 | QEVSATVQKVMERLEYCNPYRLVWQ | HHHHHHHHHHHHHTTT-S-EEEEEE | aaaaaaaaaaaaaallabwbbxbbb |
1lbq_A_248 | 1lbq | A | 250 | 274 | AEVAATVYNIMQKLKFKNPYRLVWQ | HHHHHHHHHHHHHTTT-S-EEEEEE | aaaaaaaaaaaaaallabwbbxbbb |
1r3s_A_132 | 1r3s | A | 132 | 156 | GYVFQAITLTRQRLAGRVPLIGFAG | HHHHHHHHHHHHHHTTSS-EEEEEE | aaaaaaaaaaaaaalvabxbxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hrk_A_276 | 1hrk | A | FESFE2/S2 (INORGANIC) CLUSTER | R - 298 |
1r3s_A_132 | 1r3s | A | 1CPCOPROPORPHYRIN I | F - 154 |
Clusters included in this Subclass |
CLUSTER: HE.5.257 |