Information on SUBCLASS 5.5.1 |
Subclass Accession number: 5758
Subclass: 5.5.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 28 Average sequence ID (%) : 18.4 +/- 18.3 Average RMSD (Å) : 0.821 +/- 0.310 Consensus geometry
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Consensus Sequence: | pXhXXcpXh |
(φψ)-conformation: | aapppgpbb |
Pattern: | x | [adeknqrst] | x | [afiklmtv] | [adekqrst] | [adegknqrt] | [ailmv] | [deknprst] | x | [degkqt] | [adegkns] | x | [FILMV] | [filtv] |
Conservation: | -1.259 | -0.641 | -0.795 | -0.289 | 0.184 | -0.738 | 1.045 | -0.226 | -0.869 | 1.261 | 0.661 | -0.770 | 2.272 | 0.165 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16pk_*_117 | 16pk | - | 117 | 130 | ADVVSKMSPGDVVL | HHHHHT--TT-EEE | aaaaaaxbpvxbbb |
1ajs_A_170 | 1ajs | A | 174 | 187 | LSDLENAPEFSIFV | HHHHHHS-TT-EEE | aaaaaaxppvpxbx |
1bed_*_31 | 1bed | - | 41 | 54 | AQLKQQLPEGAKFQ | HHHHHTS-TT-EEE | aaaaaaxxpgxbbb |
1d7y_A_132 | 1d7y | A | 136 | 149 | RRIQAGLRPQSRLL | HHHHHH--TT-EEE | aaaaaaxxxvxbbb |
1e89_A_59 | 1e89 | A | 62 | 75 | LTFLEKLPQGEKVI | HHHHHHS-TT--EE | aaaaaapppvxbbb |
1fsu_*_211 | 1fsu | - | 220 | 233 | IALITNHPPEKPLF | HHHHHT--TTS-EE | aaaaaaxxpvbwbb |
1fvk_A_42 | 1fvk | A | 44 | 57 | DNVKKKLPEGVKMT | HHHHTTS-TT--EE | aaaaaaxxxvxbbb |
1g0o_A_140 | 1g0o | A | 147 | 160 | REAYKHLEIGGRLI | HHHHHHS-TT-EEE | aaaaaaxxxvxbbb |
1k7c_A_53 | 1k7c | A | 55 | 68 | ENIADVVTAGDYVI | HHHHHH--TT-EEE | aaaaaaxbpvxbbb |
1mgt_A_91 | 1mgt | A | 98 | 111 | EWLTKNVKRGSVIT | HHHHHHS-TT--EE | aaaaaaxxpvbbbx |
1nw3_A_247 | 1nw3 | A | 254 | 267 | KERFANMKEGGRIV | HHHHTT--TT-EEE | aaaaaaxxpvxbbb |
1oaa_*_19 | 1oaa | - | 26 | 39 | PQLARLLSPGSVML | HHHHTTB-TT-EEE | aaaaaaxxpvxbbb |
1odo_A_108 | 1odo | A | 126 | 139 | VDRLAELPAGEPVD | HHHHHHS-TTS-EE | aaaaaaxpxvxxbx |
1ogc_A_9 | 1ogc | A | 12 | 25 | AKILADLGHTDKIV | HHHHHH--TT-EEE | aaaaaapbpvxbbb |
1php_*_97 | 1php | - | 100 | 113 | KAAVDRLNEGDVLL | HHHHHT--TT-EEE | aaaaaaxbpvxbbb |
1q1r_A_136 | 1q1r | A | 140 | 153 | ECIRRQLIADNRLV | HHHHHT--TT-EEE | aaaaaaxbpvxbbb |
1qj4_A_59 | 1qj4 | A | 62 | 75 | LTFLEALPPGEKVI | HHHHHTS-TT--EE | aaaaaaxxpvxbbb |
1qnt_A_94 | 1qnt | A | 100 | 113 | WKLLKVVKFGEVIS | HHHHHH--TT--EE | aaaaaaxxxvbbbx |
1qpg_*_100 | 1qpg | - | 103 | 116 | EAAVKASAPGSVIL | HHHHHT--TTEEEE | aaaaaaxxpvxbbb |
1sfe_*_95 | 1sfe | - | 101 | 114 | WQALRTIPCGETVS | HHHHTTS-TT--EE | aaaaaaxxxgbbbx |
1v6s_A_94 | 1v6s | A | 97 | 110 | RREAEALRPGEVLL | HHHHHT--TT-EEE | aaaaaaxbpvxbbb |
1vpe_*_97 | 1vpe | - | 100 | 113 | KKAVEELKEGEVLL | HHHHHT--TTEEEE | aaaaaaxxxvbbbb |
1yaa_A_170 | 1yaa | A | 174 | 187 | LNAIQKAPEGSIFV | HHHHHHS-TT-EEE | aaaaaaxxpvxxbx |
2ay1_A_170 | 2ay1 | A | 174 | 187 | KADLAAAKKGDMVL | HHHHHT--TT-EEE | aaaaaaxxxgxbbx |
2cmd_*_11 | 2cmd | - | 18 | 31 | LLLKTQLPSGSELS | HHHHHHS-TT-EEE | aaaaaapppvxbbb |
2cst_A_170 | 2cst | A | 174 | 187 | LDDMEKAPEFSIFI | HHHHHTS-TT-EEE | aaaaaaxxpvpxbx |
2pgd_*_78 | 2pgd | - | 85 | 98 | EKLVPLLDIGDIII | HHHHHH--TT-EEE | aaaaaabxxgxbbb |
7aat_A_170 | 7aat | A | 174 | 187 | MEDISKIPEKSIIL | HHHHTTS-TT-EEE | aaaaaaxppvxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e89_A_59 | 1e89 | A | ASAACTIVE SITE A. CATALYTIC RESIDUE SER 80 IS MUTATED TO ALA | A - 80 |
Clusters included in this Subclass |
CLUSTER: HE.4.223 |
CLUSTER: HE.5.75 |
CLUSTER: HE.5.99 |
CLUSTER: HE.6.21 |
CLUSTER: HE.6.284 |
CLUSTER: HE.6.290 |
CLUSTER: HE.7.11 |
CLUSTER: HE.7.50 |
CLUSTER: HE.8.69 |
CLUSTER: HE.8.72 |