ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.7.2

Subclass Accession number: 5765
Subclass: 5.7.2

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.8 (>75 %)  2.8.3 (>75 %)
GO : GO:0004073 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)
SCOP : 100949 (>75 %)  100950 (>75 %)  51734 (>75 %)  51735 (>75 %)  51800 (>75 %)

Number of loops: 5

Average sequence ID (%) : 32.2 +/- 32.5
Average RMSD (Å) : 0.980 +/- 0.342

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	XXXXXcXXp
(φψ)-conformation:	aalaaaabb

Pattern:	[EM]	[AGV]	[GKT]	x	x	[L]	[LM]	[DEKQ]	[ar]	[ILM]	x	[efq]	[EL]	[GNR]	x	[EFK]	[DEK]	x	[ILTV]	[DENR]	[fp]	[VY]	[fq]
Conservation:	0.733	-0.437	-0.490	-0.753	-1.032	2.494	1.764	0.600	-0.653	1.226	-1.105	-1.065	0.214	0.265	-0.777	-0.629	1.084	-1.171	0.269	0.096	-0.783	0.802	-0.652

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mb4_A_11	1mb4	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	M - 11
1mb4_A_11	1mb4	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	V - 12
1mb4_A_11	1mb4	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	G - 13
1mb4_A_11	1mb4	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	F - 34
1mb4_A_11	1mb4	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	S - 35

Clusters included in this Subclass