Information on SUBCLASS 6.26.1 |
Subclass Accession number: 8670
Subclass: 6.26.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 14.3 +/- 13.8 Average RMSD (Å) : 1.025 +/- 0.359 Consensus geometry
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Consensus Sequence: | XhhXphpXhh |
(φψ)-conformation: | aalpbaapbb |
Pattern: | x | x | [QST] | [LT] | x | [QRS] | x | x | [EGR] | x | [ACL] | x | [HLV] | [DR] | x | [DEST] | [AKST] | [ATV] | [ILY] | x | [AFV] |
Conservation: | -2.048 | -1.664 | 0.824 | 1.501 | -1.482 | 0.967 | -0.663 | -1.215 | 0.127 | -0.845 | 0.509 | 0.600 | -0.388 | 0.966 | 0.567 | 0.429 | 0.065 | 0.671 | 1.267 | -0.227 | 0.043 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e0c_A_66 | 1e0c | A | 66 | 86 | REQLESLFGELGHRPEAVYVV | HHHHHHHHHHHT--TT-EEEE | aaaaaaaaaaavpbaapbxbb |
1gcy_A_342 | 1gcy | A | 345 | 365 | IRQLIQVRRAAGVRADSAISF | HHHHHHHHHHHT--TT-EEEE | aaaaaaaaaaavxbaapxbbb |
1jvb_A_155 | 1jvb | A | 156 | 176 | GITTYRAVRKASLDPTKTLLV | HHHHHHHHHHTT--TT-EEEE | aaaaaaaaaaalxbaabbbbb |
1mdb_A_204 | 1mdb | A | 208 | 228 | IYSLKRSVEVCWLDHSTVYLA | HHHHHHHHHHHT--TT-EEEE | aaaaaaaaaaalxbaaxbxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e0c_A_66 | 1e0c | A | MO6MAGNESIUM ION, 6 WATERS COORDINATED | R - 66 |
1e0c_A_66 | 1e0c | A | MO6MAGNESIUM ION, 6 WATERS COORDINATED | E - 70 |
1e0c_A_66 | 1e0c | A | EDO1,2-ETHANEDIOL | S - 71 |
1e0c_A_66 | 1e0c | A | EDO1,2-ETHANEDIOL | L - 72 |
1e0c_A_66 | 1e0c | A | EDO1,2-ETHANEDIOL | E - 75 |
1e0c_A_66 | 1e0c | A | EDO1,2-ETHANEDIOL | L - 76 |
1jvb_A_155 | 1jvb | A | MSESELENOMETHIONINE | S - 155 |
1jvb_A_155 | 1jvb | A | ZNZINC ION | S - 155 |
1jvb_A_155 | 1jvb | A | MSESELENOMETHIONINE | G - 156 |
1jvb_A_155 | 1jvb | A | MSESELENOMETHIONINE | T - 159 |
1jvb_A_155 | 1jvb | A | MSESELENOMETHIONINE | Y - 160 |
Clusters included in this Subclass |
CLUSTER: HE.5.340 |
CLUSTER: HE.6.203 |