Information on SUBCLASS 6.8.1 |
Subclass Accession number: 418
Subclass: 6.8.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.2 (>75 %) 1.2.1 (>75 %) 1.2.1.123.2 (>75 %) 3.2.1 (>75 %) 3.2.1.17 (>75 %) GO : GO:0003796 (>75 %) GO:0004553 (>75 %) GO:0008943 (>75 %) GO:0016620 (>75 %) GO:0016798 (>75 %) GO:0016903 (>75 %) SCOP : 53821 (>50 %) 53822 (>50 %) 53823 (>50 %) 53954 (>75 %) 53955 (>75 %) 53960 (>75 %) 55346 (>75 %) 55347 (>75 %) 55348 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 13.9 Average RMSD (Å) : 0.500 +/- 0.200 Consensus geometry
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Consensus Sequence: | hpcXXXXXXh |
(φψ)-conformation: | aalbpbpabb |
Pattern: | [AFV] | [EW] | [APT] | [AI] | x | x | x | [GL] | [EKS] | [DGN] | [EFK] | [KPR] | [KV] | [PQ] | [AST] | x | [LY] | x |
Conservation: | -0.633 | 0.818 | -0.097 | 0.436 | -0.901 | -0.901 | -0.499 | -0.996 | 0.438 | 0.706 | -0.901 | 0.304 | -0.044 | 2.174 | 0.572 | -1.034 | 1.859 | -1.302 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1drk_*_237 | 1drk | - | 245 | 262 | VETADKVLKGEKVQAKYP | HHHHHHHHTT----SEEE | aaaaaaaaavxxbxabbx |
1jx6_A_313 | 1jx6 | A | 320 | 337 | AEAIKWDLEDKPVPTVYS | HHHHHHHHTT----SEEE | aaaaaaaaalbxbxabbb |
1pfv_A_304 | 1pfv | A | 304 | 321 | FWPAMLEGSNFRKPSNLF | HHHHHHHHTTB---SEEE | aaaaaaaaavbxbpabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1drk_*_237 | 1drk | * | RIPRIBOSE(PYRANOSE FORM) | I - 240 |
Clusters included in this Subclass |
CLUSTER: HE.6.124 |