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Information on SUBCLASS 7.3.1
Subclass Accession number: 5935
Subclass: 7.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 21.1 +/- 19.9
Average RMSD (Å) : 1.163 +/- 0.366

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: ppGXhpXcXXh
(φψ)-conformation: aalabppgpbb
Pattern: x[AILMP]x[ADGK][LMTV][afiklt][adegk][AL][ilvw][dkqrt][adekt][DG]x[afil][EKQR][EKPRS][EGN][ADGQST]x[alv][lv]
Conservation:-0.469-0.328-1.081-0.0380.639-1.208-0.8720.898-0.268-0.379-0.5382.504-0.936-0.6001.4300.3471.766-0.370-1.1400.0750.570
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f2d_A_2961f2d   A299319SMQGLIALIKEDYFKPGANVLHHHHHHHHHHTT-S-TT-EEEaaaaaaaaaaalaxppvxbbx
1h1d_A_1471h1d   A147167YLPDTLLLEKCGLLRKGTVLLHHHHHHHHHHTT---TT-EEEaaaaaaaaaaavabbpgxbbb
1hnj_A_2791hnj   A280300VPCALDEAVRDGRIKPGQLVLHHHHHHHHHHTT-S-TT-EEEaaaaaaaaaaavaxbpvxxbb
1hzp_A_2791hzp   A280300IPLAMAELLTTGAAKPGDLALHHHHHHHHHHTTSS-TT-EEEaaaaaaaaaaavabbpvxxbb
1oaa_*_2351oaa   -238258SAQKLLGLLQKDTFQSGAHVDHHHHHHHHHHH--S-TTEEEEaaaaaaaaaaalaxxxvxbbb
1ojr_A_81ojr   A1333MIKATTDAWLKGWDERNGGNLHHHHHHHHHHHT---TT--EEaaaaaaaaaaavabxxgxebb
1ub7_A_2811ub7   A282302IPLALKEAVDAGRIREGDHVLHHHHHHHHHHHTSS-TT-EEEaaaaaaaaaaavabbpgxbbb
1v7c_A_2881v7c   A293313AMAGVFKLLREGRLEPESTVVHHHHHHHHHHTT-S-SSEEEEaaaaaaaaaaavabxxlbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f2d_A_2961f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 296
1h1d_A_1471h1d   A     MGMAGNESIUM ION Y - 147
1h1d_A_1471h1d   A     BIA1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE Y - 147
1h1d_A_1471h1d   A     SAMS-ADENOSYLMETHIONINE D - 150
1hnj_A_2791hnj   A     MLCMALONYL-COENZYME A F - 304
1hnj_A_2791hnj   A     MLCMALONYL-COENZYME A G - 305
1hzp_A_2791hzp   A     GOLGLYCEROL L - 282
1hzp_A_2791hzp   A     GOLGLYCEROL A - 285
1hzp_A_2791hzp   A     GOLGLYCEROL E - 286
1hzp_A_2791hzp   A     GOLGLYCEROL L - 287
1hzp_A_2791hzp   A     GOLGLYCEROL T - 289
1hzp_A_2791hzp   A     DAOLAURIC ACID Y - 304
1hzp_A_2791hzp   A     DAOLAURIC ACID G - 305
1oaa_*_2351oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C - 235
1ojr_A_81ojr   A     GOLGLYCEROL R - 28
1ojr_A_81ojr   A     PO4PHOSPHATE ION N - 29
1ojr_A_81ojr   A     2HADIHYDROXYACETONE N - 29
1ojr_A_81ojr   A     GOLGLYCEROL N - 29
1ojr_A_81ojr   A     ZNZINC ION G - 30
1ojr_A_81ojr   A     PO4PHOSPHATE ION G - 30
1ojr_A_81ojr   A     2HADIHYDROXYACETONE G - 30
1ojr_A_81ojr   A     GOLGLYCEROL G - 30
1ojr_A_81ojr   A     ZNZINC ION G - 31
1ojr_A_81ojr   A     PO4PHOSPHATE ION G - 31
1ojr_A_81ojr   A     2HADIHYDROXYACETONE G - 31
1ojr_A_81ojr   A     ZNZINC ION N - 32
1ojr_A_81ojr   A     PO4PHOSPHATE ION N - 32
1ojr_A_81ojr   A     2HADIHYDROXYACETONE N - 32
1ub7_A_2811ub7   A     CEAS-HYDROXY-CYSTEINE S - 305
1ub7_A_2811ub7   A     CEAS-HYDROXY-CYSTEINE F - 306
1ub7_A_2811ub7   A     CEAS-HYDROXY-CYSTEINE G - 307
1v7c_A_2881v7c   A     HEY(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID A - 289
1v7c_A_2881v7c   A     HEY(2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID S - 290
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ojr_A_81ojr   A POAPO4 A1276 BINDING SITEN - 29
1ojr_A_81ojr   A 2HA2HA BINDING SITE FOR CHAIN AG - 30
1ojr_A_81ojr   A ZNZN BINDING SITE. THE ZN ION INTERACTS WITH HET COMPOUNDS 2HA AND PO4. THESE RESIDUES HAVE 50% OCCUPANCY AND EXIST AS TWO SEPARATE CONFORMATIONS FOR THE SITEG - 31
1ojr_A_81ojr   A POAPO4 A1276 BINDING SITEN - 32

Clusters included in this Subclass
CLUSTER: HE.7.25
CLUSTER: HE.8.24
CLUSTER: HE.9.22