Information on SUBCLASS 8.1.1 |
Subclass Accession number: 5964
Subclass: 8.1.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 24.5 +/- 21.3 Average RMSD (Å) : 0.627 +/- 0.505 Consensus geometry
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Consensus Sequence: | XhGhpXXphphh |
(φψ)-conformation: | aalbpaaapabb |
Pattern: | [afgikltv] | x | [aipv] | [acgilmtv] | x | [ekrw] | [atv] | [ILMT] | [ADEKRS] | [adeknr] | [anst] | [GKN] | [ILVW] | [adekqrst] | x | [ADEGQS] | [dekq] | [CILV] | [dgnrst] | x | [FILV] | x |
Conservation: | -0.968 | -1.180 | 0.048 | -0.621 | -1.259 | -0.158 | 0.547 | 1.313 | 0.192 | -0.986 | 0.255 | 2.267 | 1.002 | -0.498 | -0.434 | -0.066 | 0.835 | 1.436 | -0.660 | -1.638 | 0.977 | -0.400 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_318 | 1afw | A | 320 | 341 | AYAIPKVLEATGLQVQDIDIFE | HHHHHHHHHHHT--GGG-SEEE | aaaaaaaaaaavbbaaaxabbb |
1bup_A_314 | 1bup | A | 314 | 335 | LDPVEKALRDAKLDKSQIHDIV | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaalbxaaaxabbb |
1e5m_A_281 | 1e5m | A | 284 | 305 | TRAIAWALKDSGLKPEMVSYIN | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaavbxaaaxabbx |
1gz3_A_178 | 1gz3 | A | 181 | 202 | VGKLCLYTACAGIRPDQCLPVC | HHHHHHHHHHH---GGGEEEEE | aaaaaaaaaaavxpaaabbwbb |
1hnj_A_209 | 1hnj | A | 221 | 242 | AHIVDETLAANNLDRSQLDWLV | HHHHHHHHHHTT--GGG--EEE | aaaaaaaaaaalbbaaaxabbb |
1hnj_A_51 | 1hnj | A | 56 | 77 | FEAATRAIEMAGIEKDQIGLIV | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaavbxaaaxabbb |
1hzp_A_209 | 1hzp | A | 221 | 242 | GDVGRRAMDAAGVRPDQIDVFV | HHHHHHHHHHTT--GGG--EEE | aaaaaaaaaaavbxaaaxabbb |
1hzp_A_51 | 1hzp | A | 56 | 77 | TEACRRALSNAGLSAADIDGVI | HHHHHHHHHHTT--GGG--EEE | aaaaaaaaaaavbbaaaxabbb |
1j3n_A_275 | 1j3n | A | 278 | 299 | ALAMARALKDAGIAPEQVGYIN | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaavbxaaaxabbx |
1m3k_A_27 | 1m3k | A | 32 | 53 | ATVISAVLERAGVAAGEVNEVI | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaavbxaaaxabbb |
1m3k_A_292 | 1m3k | A | 293 | 314 | IPASRKALERAGWKIGDLDLVE | HHHHHHHHHHHT--GGG-SEEE | aaaaaaaaaaavbxaaaxabbb |
1mzj_A_60 | 1mzj | A | 65 | 86 | VAASRRALEHAGVDPAEIDLVV | HHHHHHHHHHHT--GGG--EEE | aaaaaaaaaaavbxaaaxabbb |
1qlv_A_96 | 1qlv | A | 112 | 133 | KEAAVKAIDEWGLPKSKITHLI | HHHHHHHHHHH-S-GGG--EEE | aaaaaaaaaaavxxaaaxabbb |
1s3x_A_314 | 1s3x | A | 314 | 335 | LEPVEKALRDAKLDKAQIHDLV | HHHHHHHHHHTT--GGG--EEE | aaaaaaaaaaalbbaaaxabbb |
1ub7_A_211 | 1ub7 | A | 223 | 244 | NTATLEAIEKAGLTPEDIRLFV | HHHHHHHHHHHT--GGG-SEEE | aaaaaaaaaaavbbaaaxabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.7.30 |
CLUSTER: HE.9.1 |