Information on SUBCLASS 8.10.1 |
Subclass Accession number: 8723
Subclass: 8.10.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 62.1 +/- 14.1 Average RMSD (Å) : 0.225 +/- 0.050 Consensus geometry
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Consensus Sequence: | KpAPphPXpNFp |
(φψ)-conformation: | aabaabpaaabb |
Pattern: | [AC] | [N] | [T] | [N] | [AC] | [LY] | [IT] | [AC] | x | [K] | [NS] | [A] | [P] | [DNS] | [IL] | [P] | x | [EK] | [N] | [F] | [HST] | [AC] |
Conservation: | -0.403 | 1.175 | 0.653 | 1.175 | -0.448 | -0.873 | -1.041 | -0.403 | -1.314 | 0.653 | -0.442 | 0.131 | 1.696 | -0.846 | -0.362 | 1.696 | -1.404 | -0.353 | 1.175 | 1.175 | -1.193 | -0.448 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8p_A_136 | 1b8p | A | 136 | 157 | ANTNAYIAMKSAPSLPAKNFTA | HHHHHHHHHHT-TTS-GGGEEE | aaaaaaaaaaabaabxaaabbb |
1civ_A_171 | 1civ | A | 171 | 192 | CNTNALICLKNAPNIPPKNFHA | HHHHHHHHHHT-TTS-GGGEEE | aaaaaaaaaaabaaxpaaaxbb |
5mdh_A_132 | 5mdh | A | 132 | 153 | ANTNCLTASKSAPSIPKENFSC | HHHHHHHHHHT-TTS-GGGEEE | aaaaaaaaaaabaabpaaaxbb |
7mdh_A_175 | 7mdh | A | 175 | 196 | CNTNALICLKNAPDIPAKNFHA | HHHHHHHHHHT-TTS-GGGEEE | aaaaaaaaaaabaabpaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1civ_A_171 | 1civ | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | C - 171 |
5mdh_A_132 | 5mdh | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 132 |
7mdh_A_175 | 7mdh | A | ZNZINC ION | C - 175 |
7mdh_A_175 | 7mdh | A | ZNZINC ION | N - 176 |
7mdh_A_175 | 7mdh | A | ZNZINC ION | L - 180 |
7mdh_A_175 | 7mdh | A | ZNZINC ION | K - 184 |
7mdh_A_175 | 7mdh | A | ZNZINC ION | A - 196 |
Clusters included in this Subclass |
CLUSTER: HE.8.28 |