Information on SUBCLASS 9.3.1 |
Subclass Accession number: 457
Subclass: 9.3.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.5 (>75 %) 3.5 (>75 %) 3.5.1 (>75 %) 3.5.1 (>75 %) 3.5.1.1 (>75 %) 3.5.1.1 GO : GO:0003723 (>50 %) GO:0003724 (>50 %) GO:0004067 (>75 %) GO:0004067 (>75 %) GO:0004386 (>75 %) GO:0008026 (>75 %) GO:0016462 (>75 %) GO:0016810 (>75 %) GO:0016810 (>75 %) GO:0016811 (>75 %) GO:0016811 (>75 %) GO:0016817 (>75 %) GO:0016818 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) 53773 (>75 %) 53773 (>75 %) 53774 (>75 %) 53774 (>75 %) 53775 (>75 %) 53775 (>75 %) 81268 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 30.4 +/- 17.2 Average RMSD (Å) : 0.467 +/- 0.058 Consensus geometry
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Consensus Sequence: | ppXXhpXpphphh |
(φψ)-conformation: | aalabpaaapabb |
Pattern: | [P] | [G] | [R] | [IV] | x | [D] | x | [I] | [KQR] | [EKR] | [GQR] | x | [AFL] | [DKR] | [TV] | [DH] | [HKT] | [AIV] | [HKQ] | [IM] | [FIL] | [IV] | [LV] |
Conservation: | 2.309 | 1.769 | 1.228 | 0.435 | -1.233 | 1.769 | -1.233 | 0.688 | -0.092 | -0.212 | -0.872 | -1.173 | -0.992 | -0.632 | -0.247 | 0.150 | -0.872 | -0.512 | -0.392 | 0.142 | -0.392 | 0.435 | -0.070 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1q0u_A_134 | 1q0u | A | 134 | 156 | PGRINDFIREQALDVHTAHILVV | HHHHHHHHHTT---GGG--EEEE | aaaaaaaaaavabbaaaxabbbb |
1qde_A_146 | 1qde | A | 146 | 168 | PGRVFDNIQRRRFRTDKIKMFIL | HHHHHHHHHTTSS--TT--EEEE | aaaaaaaaaalabxaaaxabbbb |
1vec_A_212 | 1vec | A | 212 | 234 | PGRILDLIKKGVAKVDHVQMIVL | HHHHHHHHHTT-S--TT--EEEE | aaaaaaaaaavaxxaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | P - 134 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | V - 148 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | H - 149 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | A - 151 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | H - 152 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | I - 153 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | L - 154 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | V - 155 |
1q0u_A_134 | 1q0u | A | MSESELENOMETHIONINE | V - 156 |
Clusters included in this Subclass |
CLUSTER: HE.9.6 |