Information on SUBCLASS 1.1.15 |
Subclass Accession number: 2039
Subclass: 1.1.15 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 10.1 +/- 13.9 Average RMSD (Å) : 0.675 +/- 0.205 Consensus geometry
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Consensus Sequence: | hppXX |
(φψ)-conformation: | aapaa |
Pattern: | [knpqs] | [aekn] | [agitv] | [aflvy] | [nqrsy] | [nst] | x | x | x | [afikm] | [aeqr] |
Conservation: | -0.091 | 0.271 | -0.511 | 0.055 | -0.165 | 2.734 | -1.203 | -0.532 | -0.263 | -0.541 | 0.246 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ei9_A_168 | 1ei9 | A | 168 | 178 | NAGAYNKAIQE | HHHHTSHHHHH | aaaaaxaaaaa |
1jb0_A_187 | 1jb0 | A | 187 | 197 | LEWFQNVESML | HHHHT-HHHHH | aaaaaxaaaaa |
1ktb_A_275 | 1ktb | A | 278 | 288 | KKILQNRLMIQ | HHHHT-HHHHH | aaaaapaaaaa |
1nvu_S_881 | 1nvu | S | 881 | 891 | SPVYRLDHTFE | HHHHT-HHHHH | aaaaaxaaaaa |
1on3_A_460 | 1on3 | A | 472 | 482 | QNAFNTPYVAA | HHHHSSHHHHH | aaaaabaaaaa |
1uas_A_255 | 1uas | A | 258 | 268 | KNILSNSEVIA | HHHHT-HHHHH | aaaaaxaaaaa |
1urs_A_335 | 1urs | A | 335 | 345 | SAVQSSPTFKA | HHHHT-HHHHH | aaaaaxaaaaa |
5csm_A_6 | 5csm | A | 6 | 16 | PETVLNLQNIR | HHHHS-HHHHH | aaaaaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | L - 12 |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | R - 16 |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | L - 19 |
Clusters included in this Subclass |
CLUSTER: HH.2.92 |
CLUSTER: HH.3.99 |