Information on SUBCLASS 1.1.29 |
Subclass Accession number: 4376
Subclass: 1.1.29 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 37.3 +/- 30.6 Average RMSD (Å) : 0.475 +/- 0.287 Consensus geometry
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Consensus Sequence: | hTphp |
(φψ)-conformation: | aapaa |
Pattern: | [ADE] | [AILM] | [iv] | [AL] | [AM] | [T] | [DH] | [LMP] | [KSY] | [FK] | [HQ] | [FMQ] | [DNSV] | [fl] | [AL] | [A] | [DE] |
Conservation: | -0.382 | -0.514 | -0.704 | -0.259 | -0.157 | 2.196 | 0.728 | -0.628 | -0.834 | -0.454 | 1.340 | -0.628 | -1.111 | -1.061 | -0.259 | 1.461 | 1.265 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f0j_A_328 | 1f0j | A | 340 | 356 | DMVLATDMSKHMSLLAD | HHHHTT-GGGHHHHHHH | aaaaaaxaaaaaaaaaa |
1m2r_A_315 | 1m2r | A | 315 | 331 | ALEAMTHPYFQQVRAAE | HHHHHTSGGGHHHHHHH | aaaaaaxaaaaaaaaaa |
1oyn_A_254 | 1oyn | A | 266 | 282 | DIVLATDMSKHMNLLAD | HHHHTTSGGGHHHHHHH | aaaaaaxaaaaaaaaaa |
1so2_A_876 | 1so2 | A | 888 | 904 | EAILATDLKKHFDFLAE | HHHHTT-GGGHHHHHHH | aaaaaaxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f0j_A_328 | 1f0j | A | ZNZINC ION | T - 345 |
1f0j_A_328 | 1f0j | A | MGMAGNESIUM ION | T - 345 |
1f0j_A_328 | 1f0j | A | ARSARSENIC | T - 345 |
1f0j_A_328 | 1f0j | A | ARSARSENIC | M - 347 |
1oyn_A_254 | 1oyn | A | ZNZINC ION | T - 271 |
1oyn_A_254 | 1oyn | A | ROLROLIPRAM | M - 273 |
1so2_A_876 | 1so2 | A | MGMAGNESIUM ION | T - 893 |
1so2_A_876 | 1so2 | A | 6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE | L - 895 |
Clusters included in this Subclass |
CLUSTER: HH.5.213 |