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Information on SUBCLASS 1.1.34
Subclass Accession number: 4381
Subclass: 1.1.34 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 8.3 +/- 10.8
Average RMSD (Å) : 0.550 +/- 0.238

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: XXpXX
(φψ)-conformation: aapaa
Pattern: [ADGQ][AEFL][AQT]xx[EHW]x[CQRT][PQS][ASV][KRS]x
Conservation:-0.414-1.4220.680-0.805-1.2200.970-0.817-0.5151.4830.6801.2900.090
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cpt_*_1091cpt   -115126GLTLNWFQPASIHHHHTTSSHHHHaaaaaaaxaaaa
1qjv_A_3461qjv   A346357DAQAAEYTQSKVHHHHGGGSHHHHaaaaaaaxaaaa
1ukk_A_1091ukk   A116127AEAAKEGCPVSRHHHHTTSSHHHHaaaaaaabaaaa
1uyr_A_20831uyr   A20922103QFADLHDRSSRMHHHHTTSSHHHHaaaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_1091cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE H - 110
1cpt_*_1091cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 114
1cpt_*_1091cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 121
1ukk_A_1091ukk   A     CSD3-SULFINOALANINE C - 123
1ukk_A_1091ukk   A     CSD3-SULFINOALANINE P - 124
1ukk_A_1091ukk   A     CSD3-SULFINOALANINE V - 125
1ukk_A_1091ukk   A     CSD3-SULFINOALANINE S - 126
1ukk_A_1091ukk   A     CSD3-SULFINOALANINE R - 127

Clusters included in this Subclass
CLUSTER: HH.3.266
CLUSTER: HH.4.369