Information on SUBCLASS 1.1.44 |
Subclass Accession number: 2068
Subclass: 1.1.44 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.0 +/- 8.0 Average RMSD (Å) : 0.767 +/- 0.115 Consensus geometry
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Consensus Sequence: | pXpXp |
(φψ)-conformation: | aapaa |
Pattern: | x | [AE] | [ADV] | [IY] | [KQT] | x | [HRS] | [PR] | [DKQ] | [KL] | [ERY] | x | [FLV] | [AQS] | [EKS] | x | x | [EFL] | [KQT] |
Conservation: | -1.432 | 0.897 | -1.266 | 1.219 | 0.233 | -0.433 | 0.233 | 2.157 | 0.732 | 0.729 | -0.433 | -1.432 | 0.399 | 0.233 | 0.732 | -0.766 | -0.600 | -1.432 | 0.233 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c1k_A_47 | 1c1k | A | 47 | 65 | DAAYQKRRDKYFFQKLSEK | HHHHHH-S-HHHHHHHHHH | aaaaaapaaaaaaaaaaaa |
1mba_*_51 | 1mba | - | 51 | 69 | VADIKASPKLRDVSSRIFT | HHHHHT-TTHHHHHHHHHH | aaaaaaxaaaaaaaaaaaa |
1q5z_A_596 | 1q5z | A | 606 | 624 | KEVITHHPQKEKLAEIALQ | HHHHHT-TTHHHHHHHHHH | aaaaaaxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 63 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 66 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 67 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 68 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 70 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 71 |
1mba_*_51 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 74 |
Clusters included in this Subclass |
CLUSTER: HH.3.203 |