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Information on SUBCLASS 1.1.7
Subclass Accession number: 8789
Subclass: 1.1.7 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 9.2 +/- 12.1
Average RMSD (Å) : 0.635 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XppXX
(φψ)-conformation: aapaa
Pattern: xxxxxxx[cdehnrsty]x[adegknr]xx
Conservation:-1.122-0.924-0.7550.646-0.955-0.9511.217-0.3971.9140.4530.1260.749
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ax4_A_3061ax4   A314325QGLEEGTEEEYLHHHHHTT-HHHHaaaaaaaxaaaa
1bj4_A_3061bj4   A314325VALKQAMTLEFKHHHHHTTSHHHHaaaaaaaxaaaa
1chk_A_941chk   A100111DWATAAKDTVFQHHHHHTTSHHHHaaaaaaaxaaaa
1dfo_A_2661dfo   A274285VALKEAMEPEFKHHHHHTTSHHHHaaaaaaaxaaaa
1e6b_A_1901e6b   A195206CYESYNELPAFQHHHHHTT-HHHHaaaaaaaxaaaa
1ekj_A_2661ekj   A281292SLGNLLTYPFVRHHHHHTTSHHHHaaaaaaaxaaaa
1ezv_B_1161ezv   B130141DYAVAEQCPVKSHHHHHTT-HHHHaaaaaaabaaaa
1f3l_A_2151f3l   A216227VYFSSYGHYGIHHHHHHTSSSHHHaaaaaaaxaaaa
1gow_A_321gow   A3243DWYKWVHDPENMHHHHHTT-HHHHaaaaaaaxaaaa
1hr6_B_1371hr6   B150161ESEEVDKMYDEVHHHHHTT-HHHHaaaaaaabaaaa
1i9z_A_7611i9z   A761772LSYLFEYDQLNKHHHHHTTBHHHHaaaaaaaxaaaa
1iay_A_3121iay   A317328FLAAMLSDEKFVHHHHHTT-HHHHaaaaaaaxaaaa
1iqy_A_1071iqy   A108119VEQLLATDERWLHHHHHTT-HHHHaaaaaaaxaaaa
1j7n_A_2511j7n   A256267LEELKDQRMLSRHHHHHTT-HHHHaaaaaaaxaaaa
1jk0_A_1941jk0   A200211LFNAIHTIPEIGHHHHHTT-HHHHaaaaaaaxaaaa
1l0l_A_1241l0l   A137148ELQENDTSMRDVHHHHHTT-HHHHaaaaaaaxaaaa
1m1n_B_371m1n   B4253EVFQWTTTKEYQHHHHHTTSHHHHaaaaaaaxaaaa
1n3l_A_3061n3l   A323334PIREKFNTPALKHHHHHTTSHHHHaaaaaaaxaaaa
1oac_A_1891oac   A195206VQNIINNSEEFAHHHHHHT-HHHHaaaaaaabaaaa
1pjs_A_1741pjs   A178189FWEKFFVNDRLAHHHHHTT-HHHHaaaaaaaxaaaa
1pmt_*_1761pmt   -181192YLARIAQRPNVHHHHHHHTSHHHHaaaaaaapaaaa
1q5n_A_4031q5n   A403414LKDIISQVDEVKHHHHHTT-HHHHaaaaaaaxaaaa
2hgs_A_2972hgs   A297308IATQLAGTKKVQHHHHHTTSHHHHaaaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekj_A_2661ekj   A     EGLETHYLENE GLYCOL A - 280
1ekj_A_2661ekj   A     EGLETHYLENE GLYCOL N - 284
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 217
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 218
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 221
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE H - 227
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 230
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 231
1hr6_B_1371hr6   B     ZNZINC ION I - 147
1hr6_B_1371hr6   B     ZNZINC ION E - 150
1pjs_A_1741pjs   A     PGETRIETHYLENE GLYCOL F - 183
2hgs_A_2972hgs   A     MGMAGNESIUM ION K - 305
2hgs_A_2972hgs   A     SULSULFATE ANION K - 305
2hgs_A_2972hgs   A     ADPADENOSINE-5'-DIPHOSPHATE K - 305
2hgs_A_2972hgs   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 308

Clusters included in this Subclass
CLUSTER: HH.2.24
CLUSTER: HH.3.44
CLUSTER: HH.4.17
CLUSTER: HH.4.39