Information on SUBCLASS 1.10.1 |
Subclass Accession number: 2159
Subclass: 1.10.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1.1 GO : GO:0004022 (>75 %) GO:0008270 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) GO:0046914 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 15.3 +/- 14.5 Average RMSD (Å) : 0.150 +/- 0.058 Consensus geometry
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Consensus Sequence: | hpGXh |
(φψ)-conformation: | aaFaa |
Pattern: | [ASV] | [DENY] | x | [ILY] | x | [G] | x | [AILM] | [KST] | x | x | [AILT] |
Conservation: | -0.223 | -0.292 | -0.623 | 0.229 | -0.212 | 3.021 | -0.187 | -0.085 | 0.199 | -0.706 | -0.706 | -0.416 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a99_A_203 | 1a99 | A | 203 | 214 | ADDYTGPATDLL | HHHHHTHHHHHH | aaaaaFaaaaaa |
1eer_A_138 | 1eer | A | 146 | 157 | SNFLRGKLKLYT | HHHHHTHHHHHH | aaaaaFaaaaaa |
1h2s_A_122 | 1h2s | A | 138 | 149 | VYYLVGPMTESA | HHHHHTHHHHHH | aaaaaFaaaaaa |
1qmg_A_353 | 1qmg | A | 353 | 364 | VECITGVISKTI | HHHHHTHHHHHH | aaaaaFaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h2s_A_122 | 1h2s | A | RETRETINAL | L - 126 |
1h2s_A_122 | 1h2s | A | RETRETINAL | F - 127 |
1h2s_A_122 | 1h2s | A | RETRETINAL | G - 130 |
1h2s_A_122 | 1h2s | A | RETRETINAL | A - 131 |
1h2s_A_122 | 1h2s | A | RETRETINAL | F - 134 |
Clusters included in this Subclass |
CLUSTER: HH.0.39 |