Information on SUBCLASS 1.2.11 |
Subclass Accession number: 8833
Subclass: 1.2.11 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 12.1 +/- 14.4 Average RMSD (Å) : 0.700 +/- 0.141 Consensus geometry
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Consensus Sequence: | XpXXp |
(φψ)-conformation: | aabaa |
Pattern: | [dept] | [aktv] | [FLVY] | [adet] | [AKNS] | x | [DKPRT] | [EKTW] | x | x | [AEG] |
Conservation: | -0.371 | -0.067 | 1.388 | -0.620 | 1.128 | -1.303 | -0.034 | 0.188 | -0.579 | -1.310 | 1.578 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b31_A_24 | 1b31 | A | 25 | 35 | YTLTKNTKNPA | HHHHS-SHHHH | aaaaabaaaaa |
1bgv_A_33 | 1bgv | A | 34 | 44 | PVVDAHPEYEE | HHHHT-HHHHH | aaaaabaaaaa |
1e6y_A_1387 | 1e6y | A | 1403 | 1413 | ETYEKFPTALE | HHHHH-HHHHH | aaaaabaaaaa |
1jqn_A_508 | 1jqn | A | 519 | 529 | TQLLNIDWYRG | HHHHHSHHHHH | aaaaaxaaaaa |
1k4g_A_165 | 1k4g | A | 184 | 194 | DAFDSRKEQAE | HHHHHSHHHHH | aaaaabaaaaa |
1m15_A_288 | 1m15 | A | 288 | 298 | PKLAKDRKVLE | HHHHHSHHHHH | aaaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | T - 31 |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | K - 32 |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | A - 35 |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | I - 36 |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | A - 39 |
1b31_A_24 | 1b31 | A | PCAPYROGLUTAMIC ACID | D - 40 |
Clusters included in this Subclass |
CLUSTER: HH.2.57 |