Logo
Information on SUBCLASS 1.2.11
Subclass Accession number: 8833
Subclass: 1.2.11 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 12.1 +/- 14.4
Average RMSD (Å) : 0.700 +/- 0.141

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XpXXp
(φψ)-conformation: aabaa
Pattern: [dept][aktv][FLVY][adet][AKNS]x[DKPRT][EKTW]xx[AEG]
Conservation:-0.371-0.0671.388-0.6201.128-1.303-0.0340.188-0.579-1.3101.578
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b31_A_241b31   A2535YTLTKNTKNPAHHHHS-SHHHHaaaaabaaaaa
1bgv_A_331bgv   A3444PVVDAHPEYEEHHHHT-HHHHHaaaaabaaaaa
1e6y_A_13871e6y   A14031413ETYEKFPTALEHHHHH-HHHHHaaaaabaaaaa
1jqn_A_5081jqn   A519529TQLLNIDWYRGHHHHHSHHHHHaaaaaxaaaaa
1k4g_A_1651k4g   A184194DAFDSRKEQAEHHHHHSHHHHHaaaaabaaaaa
1m15_A_2881m15   A288298PKLAKDRKVLEHHHHHSHHHHHaaaaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID T - 31
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID K - 32
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID A - 35
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID I - 36
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID A - 39
1b31_A_241b31   A     PCAPYROGLUTAMIC ACID D - 40

Clusters included in this Subclass
CLUSTER: HH.2.57