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Information on SUBCLASS 1.2.12
Subclass Accession number: 4430
Subclass: 1.2.12 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 32.1 +/- 24.1
Average RMSD (Å) : 0.288 +/- 0.083

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hDchX
(φψ)-conformation: aabaa
Pattern: [FILV][ADGSTV][dkn][AG][ALMV][EGKS][hkns][ILMV][DG][DN][IL]x[AGST][agt]
Conservation:0.097-1.125-0.7550.6900.026-0.343-0.6560.5171.5251.6061.096-1.725-0.071-0.882
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fhj_B_581fhj   B7184FSDGLKNLDNLKGTHHHHHHTGGGHHHHaaaaaaaaabaaaa
1g08_A_531g08   A6679LTKAVEHLDDLPGAHHHHHHTTT-HHHHaaaaaaaaabaaaa
1g08_B_581g08   B7184FSNGMKHLDDLKGTHHHHHHTTT-HHHHaaaaaaaaabaaaa
1gcv_A_531gcv   A6679VVKAAEHVDDLHSHHHHHHHTGGGHHHHaaaaaaaaabaaaa
1jeb_A_531jeb   A6679VGDAVKSIDDIGGAHHHHHHTTT-HHHHaaaaaaaaabaaaa
1la6_A_541la6   A6780IALAVSKIDDLKTGHHHHHHTTT-HHHHaaaaaaaaabaaaa
1out_A_541out   A6780IGKAVGLMDDLVGGHHHHHHTTT-HHHHaaaaaaaaabaaaa
1out_B_711out   B7184LDKAVKNMGNILATHHHHHHTTT-HHHHaaaaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fhj_B_581fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE H - 63
1fhj_B_581fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE K - 66
1fhj_B_581fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE V - 67
1fhj_B_581fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE S - 70
1fhj_B_581fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 71
1g08_A_531g08   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 58
1g08_A_531g08   A     CMOCARBON MONOXIDE H - 58
1g08_A_531g08   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 61
1g08_A_531g08   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 62
1g08_A_531g08   A     CMOCARBON MONOXIDE V - 62
1g08_B_581g08   B     CMOCARBON MONOXIDE H - 63
1g08_A_531g08   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 65
1g08_A_531g08   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 66
1g08_B_581g08   B     CMOCARBON MONOXIDE V - 67
1gcv_A_531gcv   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 63
1gcv_A_531gcv   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 66
1jeb_A_531jeb   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 63
1la6_A_541la6   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 59
1la6_A_541la6   A     CMOCARBON MONOXIDE H - 59
1la6_A_541la6   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 62
1la6_A_541la6   A     CMOCARBON MONOXIDE V - 63
1la6_A_541la6   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 65
1la6_A_541la6   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 66
1la6_A_541la6   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 67
1out_A_541out   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 62
1out_A_541out   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 64
1out_A_541out   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 66
1out_B_711out   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1out_B_711out   B     HEMPROTOPORPHYRIN IX CONTAINING FE K - 73

Clusters included in this Subclass
CLUSTER: HH.5.35