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Information on SUBCLASS 1.2.15
Subclass Accession number: 2093
Subclass: 1.2.15 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
GO : GO:0051213 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 14.3 +/- 13.6
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXcXp
(φψ)-conformation: aabaa
Pattern: [AFLV]xxx[al]xx[DEKN][HNP][ENS]xxx[adnqt][FGLVY][ailv]
Conservation:0.330-0.747-1.074-0.5390.551-0.820-0.4331.9452.1041.319-0.687-0.669-0.665-0.635-0.0730.093
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b79_A_291b79   A3651VLGGLMLDNERWDDVAHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1hu3_A_7851hu3   A795810VFEKAIDEPSFSVAYAHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1hw1_A_831hw1   A8398LETLARLDHESVPQLIHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1lp1_A_241lp1   A3045FIFSLWDDPSQSANLLHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1n40_A_2531n40   A255270LRNLLHEKPELIPAGVHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1psz_A_1441psz   A155170AKQLSAKDPNNKEFYEHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
1qsa_A_1851qsa   A190205AIISLANNPNTVLTFAHHHHHHH-GGGHHHHHaaaaaaabaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hu3_A_7851hu3   A     MSESELENOMETHIONINE V - 791
1hu3_A_7851hu3   A     MSESELENOMETHIONINE V - 795
1hu3_A_7851hu3   A     MSESELENOMETHIONINE V - 807
1hu3_A_7851hu3   A     MSESELENOMETHIONINE A - 808
1hu3_A_7851hu3   A     MSESELENOMETHIONINE Y - 809
1hu3_A_7851hu3   A     MSESELENOMETHIONINE A - 810
1n40_A_2531n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 274
1qsa_A_1851qsa   A     GOLGLYCEROL I - 187

Clusters included in this Subclass
CLUSTER: HH.3.134
CLUSTER: HH.5.76