Information on SUBCLASS 1.2.17 |
Subclass Accession number: 8839
Subclass: 1.2.17 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.9 +/- 12.0 Average RMSD (Å) : 0.600 +/- 0.200 Consensus geometry
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Consensus Sequence: | hXpXX |
(φψ)-conformation: | aabaa |
Pattern: | x | x | [ATV] | x | [AM] | x | [DQR] | [PR] | [AE] | x | [AG] | x | [KTV] | [IL] |
Conservation: | -0.994 | -1.118 | 0.001 | -0.745 | 0.466 | -0.372 | 0.126 | 1.473 | 0.814 | -0.994 | 1.105 | -0.994 | -0.620 | 1.851 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i2t_A_1010 | 1i2t | A | 1019 | 1032 | PRVQAMQPAFASKI | HHHHHH-GGGHHHH | aaaaaabaaaaaaa |
1ll2_A_71 | 1ll2 | A | 71 | 84 | HLTLMKRPELGVTL | HHHHHH-GGGHHHH | aaaaaabaaaaaaa |
1tfr_*_226 | 1tfr | - | 229 | 242 | VEAIANDREQAKVL | HHHHHH-GGGHHHH | aaaaaabaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ll2_A_71 | 1ll2 | A | UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE | V - 82 |
1ll2_A_71 | 1ll2 | A | UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE | K - 86 |
Clusters included in this Subclass |
CLUSTER: HH.5.175 |