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Information on SUBCLASS 1.2.18
Subclass Accession number: 2096
Subclass: 1.2.18 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.5
GO : GO:0000287 (>75 %)  GO:0003676 (>75 %)  GO:0003677 (>75 %)  GO:0004518 (>75 %)  GO:0004519 (>75 %)  GO:0004553 (>75 %)  GO:0009045 (>75 %)  GO:0016788 (>75 %)  GO:0016798 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  
SCOP : 48207 (>75 %)  48208 (>75 %)  48213 (>75 %)  51658 (>75 %)  51665 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 8.7 +/- 10.8
Average RMSD (Å) : 0.700 +/- 0.089

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XppXX
(φψ)-conformation: aabaa
Pattern: xx[astv][hty][ADST][epst][dhrsw][afkl]x[aenq]
Conservation:-0.333-0.6020.9281.0731.8420.034-1.197-0.779-1.0360.070
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fi4_A_2141fi4   A215224TVATSELFKEHHHH-SHHHHaaaaxaaaaa
1h6g_A_4861h6g   A503512DDITSIDDFLHHHH-SHHHHaaaabaaaaa
1hlb_*_341hlb   -4251IFAYDPSAQNHHHH-THHHHaaaabaaaaa
1jln_A_2721jln   A277286DVVASSHLLQHHHHTTTHHHaaaabaaaaa
1nkz_A_121nkz   A3443ILSHTTWFPAHHHH-SHHHHaaaabaaaaa
3gcb_*_1683gcb   -168177YSTTASRKWNHHHHB-HHHHaaaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi4_A_2141fi4   A     MSESELENOMETHIONINE L - 214
1fi4_A_2141fi4   A     MSESELENOMETHIONINE T - 215
1fi4_A_2141fi4   A     MSESELENOMETHIONINE V - 216
1fi4_A_2141fi4   A     MSESELENOMETHIONINE A - 217
1fi4_A_2141fi4   A     MSESELENOMETHIONINE F - 222
1fi4_A_2141fi4   A     MSESELENOMETHIONINE I - 226
1h6g_A_4861h6g   A     MSESELENOMETHIONINE L - 486
1h6g_A_4861h6g   A     CACALCIUM ION L - 486
1h6g_A_4861h6g   A     MSESELENOMETHIONINE F - 487
1h6g_A_4861h6g   A     CACALCIUM ION F - 487
1h6g_A_4861h6g   A     MSESELENOMETHIONINE K - 488
1h6g_A_4861h6g   A     CACALCIUM ION K - 488
1h6g_A_4861h6g   A     MSESELENOMETHIONINE E - 489
1h6g_A_4861h6g   A     MSESELENOMETHIONINE Q - 494
1h6g_A_4861h6g   A     CACALCIUM ION D - 500
1h6g_A_4861h6g   A     CACALCIUM ION A - 501
1h6g_A_4861h6g   A     CACALCIUM ION D - 503
1h6g_A_4861h6g   A     CACALCIUM ION D - 504
1h6g_A_4861h6g   A     MSESELENOMETHIONINE I - 508
1h6g_A_4861h6g   A     CACALCIUM ION D - 510
1h6g_A_4861h6g   A     MPD2-METHYL-2,4-PENTANEDIOL L - 520
1h6g_A_4861h6g   A     MPD2-METHYL-2,4-PENTANEDIOL V - 523
1h6g_A_4861h6g   A     MPD2-METHYL-2,4-PENTANEDIOL N - 524
1h6g_A_4861h6g   A     MPD2-METHYL-2,4-PENTANEDIOL V - 527
1h6g_A_4861h6g   A     MSESELENOMETHIONINE L - 530
1h6g_A_4861h6g   A     CACALCIUM ION Q - 531
1hlb_*_341hlb   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 39
1hlb_*_341hlb   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 42
1hlb_*_341hlb   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 43
1hlb_*_341hlb   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 49
1hlb_*_341hlb   *     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 50
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE I - 14
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A I - 14
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A G - 15
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE I - 16
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A I - 16
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A P - 17
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A A - 18
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE L - 19
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A L - 19
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE L - 20
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A L - 20
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A G - 21
1nkz_A_121nkz   A     BENBENZAMIDINE G - 21
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A S - 22
1nkz_A_121nkz   A     BENBENZAMIDINE S - 22
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE V - 23
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A V - 23
1nkz_A_121nkz   A     BENBENZAMIDINE V - 23
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A T - 24
1nkz_A_121nkz   A     BENBENZAMIDINE V - 25
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE I - 26
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A I - 26
1nkz_A_121nkz   A     BENBENZAMIDINE I - 26
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A A - 27
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A I - 28
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE L - 29
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE L - 29
1nkz_A_121nkz   A     BENBENZAMIDINE L - 29
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE V - 30
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A V - 30
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A H - 31
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE L - 32
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE A - 33
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE A - 33
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE I - 34
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A I - 34
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE S - 36
1nkz_A_121nkz   A     BOGB-OCTYLGLUCOSIDE H - 37
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE T - 39
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE W - 40
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A W - 40
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE F - 41
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A F - 41
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE A - 43
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE Y - 44
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A Y - 44
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE W - 45
1nkz_A_121nkz   A     BCLBACTERIOCHLOROPHYLL A W - 45
1nkz_A_121nkz   A     RG1RHODOPIN GLUCOSIDE Q - 46

Clusters included in this Subclass
CLUSTER: HH.3.38