Information on SUBCLASS 1.2.27 |
Subclass Accession number: 4445
Subclass: 1.2.27 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.4 +/- 11.2 Average RMSD (Å) : 0.700 +/- 0.100 Consensus geometry
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Consensus Sequence: | XppXX |
(φψ)-conformation: | aabaa |
Pattern: | [AEL] | x | [AGV] | [AEL] | x | [IKV] | x | [AG] | [FPT] | [DHY] | [DHN] | [EKP] | x | [GLV] | x | [NQ] | x | x |
Conservation: | -0.843 | -0.715 | -0.200 | -0.843 | -0.458 | -0.072 | 0.390 | 1.581 | -0.715 | 0.958 | 1.601 | 0.700 | -0.843 | -0.972 | -0.586 | 2.114 | -1.101 | 0.005 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1nk4_A_558 | 1nk4 | A | 558 | 575 | ADVLEKLAPYHEIVENIL | HHHHHHHGGG-HHHHHHH | aaaaaaaaaabaaaaaaa |
1qcz_A_123 | 1qcz | A | 131 | 148 | LLAAQILATHDKELHQRL | HHHHHHHHTT-HHHHHHH | aaaaaaaaaabaaaaaaa |
1ypr_A_39 | 1ypr | A | 41 | 58 | EIGEIVQGFDNPAGLQSN | HHHHHHHHTT-THHHHHH | aaaaaaaaaabaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 126 |
1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 129 |
Clusters included in this Subclass |
CLUSTER: HH.4.128 |