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Information on SUBCLASS 1.2.31
Subclass Accession number: 4449
Subclass: 1.2.31 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.7 +/- 10.8
Average RMSD (Å) : 0.433 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXpXp
(φψ)-conformation: aabaa
Pattern: [CFV]xx[FK]x[NSV]x[ST][PTV][EN][HNQ][EQY]x
Conservation:-0.093-1.190-0.9470.547-0.825-0.703-0.3371.609-0.2151.7001.1260.395-1.068
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jqe_A_141jqe   A1931FRRFLNHSTEHQCHHHHHHTBSHHHHaaaaaaabaaaaa
1jqn_A_6781jqn   A679691VPYFRSATPEQELHHHHHHHS-HHHHaaaaaaabaaaaa
1sw6_A_3541sw6   A354366CLVKAVKSVNNYDHHHHHHHSSHHHHaaaaaaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jqe_A_141jqe   A     QUNQUINACRINE Y - 15
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 16
1jqe_A_141jqe   A     QUNQUINACRINE V - 16
1jqe_A_141jqe   A     QUNQUINACRINE E - 17
1jqe_A_141jqe   A     QUNQUINACRINE S - 18
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 19
1jqe_A_141jqe   A     QUNQUINACRINE F - 19
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 23
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 28
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE H - 29
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 32

Clusters included in this Subclass
CLUSTER: HH.3.163