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Information on SUBCLASS 1.2.38
Subclass Accession number: 2116
Subclass: 1.2.38 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  
GO : GO:0016627 (>75 %)  
SCOP : 51350 (>75 %)  51395 (>75 %)  51396 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 23.1 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: hADhX
(φψ)-conformation: aabaa
Pattern: [AP]x[FL][A][D][AP][EF][LV][CL][PS][K][AI]x
Conservation:-0.268-0.765-0.1020.8922.218-0.268-0.930-0.1020.064-0.2681.555-0.765-1.262
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ep3_A_2721ep3   A272284ANFADPFVCPKIIHHHH-TTHHHHHHaaaabaaaaaaaa
1ps9_A_3121ps9   A312324PFLADAELLSKAQHHHH-TTHHHHHHaaaabaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ep3_A_2721ep3   A     FMNFLAVIN MONONUCLEOTIDE A - 272
1ep3_A_2721ep3   A     FMNFLAVIN MONONUCLEOTIDE F - 274
1ps9_A_3121ps9   A     FS4IRON/SULFUR CLUSTER P - 312
1ps9_A_3121ps9   A     FMNFLAVIN MONONUCLEOTIDE P - 312
1ps9_A_3121ps9   A     FS4IRON/SULFUR CLUSTER L - 314
1ps9_A_3121ps9   A     FMNFLAVIN MONONUCLEOTIDE L - 314
1ps9_A_3121ps9   A     FS4IRON/SULFUR CLUSTER A - 315

Clusters included in this Subclass
CLUSTER: HH.4.275