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Information on SUBCLASS 1.2.39
Subclass Accession number: 2117
Subclass: 1.2.39 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  2 (>75 %)  3 (>75 %)  
GO : GO:0008415 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  
SCOP : 53473 (>75 %)  53474 (>75 %)  53491 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 10.0 +/- 0.0
Average RMSD (Å) : 0.900 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: PYpXX
(φψ)-conformation: aabaa
Pattern: [A]x[AV][AL][ER][IK][FL][AR][P][Y][DH][EP]x[VY][AE][EN][IK][CL][HI][NY][AR][AQ][KL][GV][KS][LY][EQ]x[LT][KY]
Conservation:1.131-0.717-0.213-0.5490.123-1.0530.123-0.3813.1473.1470.4590.123-1.053-0.045-0.3810.291-1.0530.291-0.549-0.045-0.381-0.381-0.717-0.885-0.045-0.0450.795-0.549-0.381-0.213
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1clc_*_2961clc   -307336AMAARIFRPYDPQYAEKCINAAKVSYEFLKHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHaaaaaaaaaabaaaaaaaaaaaaaaaaaaa
1nk4_A_5581nk4   A558587ADVLEKLAPYHEIVENILHYRQLGKLQSTYHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHaaaaaaaaaabaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1clc_*_2961clc   *     CACALCIUM ION A - 297

Clusters included in this Subclass
CLUSTER: HH.4.124