Information on SUBCLASS 1.2.4 |
Subclass Accession number: 4422
Subclass: 1.2.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 25 Average sequence ID (%) : 13.5 +/- 15.7 Average RMSD (Å) : 0.512 +/- 0.176 Consensus geometry
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Consensus Sequence: | XpphX |
(φψ)-conformation: | aabaa |
Pattern: | x | x | x | [dehknsty] | [adgknrs] | [acdps] | [adepst] | [afgilmpv] | [afiklv] | x |
Conservation: | -0.646 | -0.723 | -0.468 | 0.428 | 0.197 | 2.645 | -0.103 | -0.377 | -0.391 | -0.562 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acf_*_39 | 1acf | - | 47 | 56 | GAFNNADAIR | HHHH--HHHH | aaaabaaaaa |
1e85_A_71 | 1e85 | A | 71 | 80 | EIWSDAASFK | HHHHTHHHHH | aaaabaaaaa |
1eu8_A_342 | 1eu8 | A | 344 | 353 | VVSKSPHLKE | HHHH-THHHH | aaaabaaaaa |
1f2k_A_1039 | 1f2k | A | 1047 | 1056 | NAFKDATAIR | HHHH-THHHH | aaaabaaaaa |
1fs7_A_76 | 1fs7 | A | 76 | 85 | MLKEKPALVV | HHHH-THHHH | aaaabaaaaa |
1gxs_B_416 | 1gxs | B | 416 | 425 | VPVHRPAQAF | HHHH-HHHHH | aaaabaaaaa |
1i1n_A_112 | 1i1n | A | 122 | 131 | VRKDDPTLLS | HHHH-THHHH | aaaabaaaaa |
1imj_A_190 | 1imj | A | 190 | 199 | CYLDKPEEWH | HHHH-HHHHH | aaaabaaaaa |
1j8f_A_121 | 1j8f | A | 123 | 132 | YFKKHPEPFF | HHHH--HHHH | aaaabaaaaa |
1jr7_A_54 | 1jr7 | A | 56 | 65 | ALEYKSFLRF | HHHH-THHHH | aaaabaaaaa |
1kew_A_86 | 1kew | A | 88 | 97 | RSITGPAAFI | HHHH-THHHH | aaaabaaaaa |
1lt8_A_48 | 1lt8 | A | 48 | 57 | AAVEHPEAVR | HHHH-HHHHH | aaaabaaaaa |
1oc2_A_88 | 1oc2 | A | 90 | 99 | NSLNDPSPFI | HHHH--HHHH | aaaabaaaaa |
1orr_A_86 | 1orr | A | 88 | 97 | TSIDNPCMDF | HHHH-HHHHH | aaaabaaaaa |
1q1a_A_69 | 1q1a | A | 71 | 80 | FFQSDPLPFY | HHHH--HHHH | aaaabaaaaa |
1q7z_A_38 | 1q7z | A | 38 | 47 | LNIKAPDVVL | HHHH-HHHHH | aaaabaaaaa |
1q8i_A_316 | 1q8i | A | 320 | 329 | RFAEDKPALA | HHHH-HHHHH | aaaabaaaaa |
1q9i_A_423 | 1q9i | A | 425 | 434 | VRKSLCKIDK | HHHH-TTHHH | aaaabaaaaa |
1qdb_A_75 | 1qdb | A | 75 | 84 | MLAKDPALVI | HHHH-THHHH | aaaabwaaaa |
1qo2_A_103 | 1qo2 | A | 104 | 113 | KVLEDPSFLK | HHHH-TTHHH | aaaabaaaaa |
1r6d_A_89 | 1r6d | A | 91 | 100 | RSIAGASVFT | HHHH--HHHH | aaaabaaaaa |
1say_A_330 | 1say | A | 330 | 339 | ALETDDALAK | HHHH-HHHHH | aaaabaaaaa |
1uek_A_203 | 1uek | A | 206 | 215 | AFRLFPELKE | HHHH-THHHH | aaaabaaaaa |
1vj5_A_525 | 1vj5 | A | 525 | 534 | TQMDKPTEVN | HHHHSHHHHH | aaaabaaaaa |
1ypr_A_39 | 1ypr | A | 47 | 56 | QGFDNPAGLQ | HHTT-THHHH | aaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oc2_A_88 | 1oc2 | A | AC1TDX BINDING SITE FOR CHAIN A | N - 88 |
Clusters included in this Subclass |
CLUSTER: HH.1.42 |
CLUSTER: HH.2.40 |
CLUSTER: HH.3.47 |