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Information on SUBCLASS 1.2.40
Subclass Accession number: 4458
Subclass: 1.2.40 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 60.9 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XKNcY
(φψ)-conformation: aabaa
Pattern: [AV][EQ][Q][V]x[EK][L][A][GV][P][L]x[K][N][DN][Y][G][KQ][Y][L][LY][K][M]
Conservation:-1.092-0.2900.511-0.023-1.760-0.557-0.023-0.023-1.6261.579-0.023-1.6260.5111.045-0.2901.5791.045-0.5571.579-0.023-0.9580.5110.511
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h5r_A_2661h5r   A266288VEQVRKLAVPLIKNNYGQYLYKMHHHHHHHHGGGTTSHHHHHHHHHaaaaaaaaaaaaabaaaaaaaaa
1iin_A_2661iin   A266288AQQVIELAGPLSKNDYGKYLLKMHHHHHHHHGGGTTSHHHHHHHHHaaaaaaaaaaaaabaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h5r_A_2661h5r   A     THMTHYMIDINE Y - 284

Clusters included in this Subclass
CLUSTER: HH.5.323