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Information on SUBCLASS 1.2.42
Subclass Accession number: 2120
Subclass: 1.2.42 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005509 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 4.8 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: hXpRp
(φψ)-conformation: aabaa
Pattern: [AV][EP][VY][SV][GM]x[DS][R][ES]x[AC][KV][KY][TY][FQ][HK][HN]x[FV]xx
Conservation:-0.0900.3830.147-1.037-0.800-1.0370.3832.7500.147-1.2741.093-0.800-0.090-0.090-0.8000.6201.803-0.564-0.090-1.0370.383
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ehy_A_1591ehy   A162182VEVVGSSREVCKKYFKHFFDHHHHHTS-HHHHHHHHHHHHHHaaaaaabaaaaaaaaaaaaaa
1i24_A_1031i24   A103123APYSMIDRSRAVYTQHNNVIGHHHHTS-HHHHHHHHHHHHHHaaaaaabaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i24_A_1031i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE A - 103
1i24_A_1031i24   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE P - 104
1i24_A_1031i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 115
1i24_A_1031i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 119
1i24_A_1031i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 120
1i24_A_1031i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 123

Clusters included in this Subclass
CLUSTER: HH.2.198