Information on SUBCLASS 1.2.9 |
Subclass Accession number: 2087
Subclass: 1.2.9 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 11.2 +/- 13.6 Average RMSD (Å) : 0.567 +/- 0.156 Consensus geometry
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Consensus Sequence: | XXpXX |
(φψ)-conformation: | aabaa |
Pattern: | x | [aekqst] | x | [aflvy] | x | [aekqs] | [dhknrsy] | [dekp] | [aekrt] | x |
Conservation: | -0.818 | -0.020 | -1.131 | 0.290 | -0.808 | 0.842 | -0.143 | 2.295 | 0.053 | -0.560 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_777 | 1a8i | - | 787 | 796 | VSALYKNPRE | HHHHHT-HHH | aaaaaabaaa |
1ajs_A_301 | 1ajs | A | 306 | 315 | VARTLSDPEL | HHHHHHSHHH | aaaaaabaaa |
1dz4_A_253 | 1dz4 | A | 261 | 270 | MEFLAKSPEH | HHHHHT-HHH | aaaaaabaaa |
1ew6_A_43 | 1ew6 | A | 43 | 52 | DQELKSMAKF | HHHHHH-HHH | aaaaaaxaaa |
1gde_A_268 | 1gde | A | 274 | 283 | AAKALKDERS | HHHHHT-HHH | aaaaaaxaaa |
1gkm_A_331 | 1gkm | A | 355 | 364 | RISLMMDKHM | HHHHH-HHHH | aaaaaaxaaa |
1hbn_A_367 | 1hbn | A | 382 | 391 | LEQYEEYPAL | HHHHHH-HHH | aaaaaabaaa |
1hdm_B_48 | 1hdm | B | 54 | 63 | SQHLNQKDTL | HHHHHT-HHH | aaaaaaxaaa |
1hrd_A_33 | 1hrd | A | 33 | 42 | GPVVDAHPEY | HHHHHT-HHH | aaaaaabaaa |
1ji1_A_533 | 1ji1 | A | 542 | 551 | ITIRNQYPAL | HHHHHH-HHH | aaaaaabaaa |
1on2_A_107 | 1on2 | A | 117 | 126 | VQYFEEDDAR | HHHHHT-HHH | aaaaaabaaa |
1qgr_A_832 | 1qgr | A | 834 | 843 | LKLVEARPMI | HHHHHTSHHH | aaaaaabaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.2.62 |
CLUSTER: HH.3.102 |