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Information on SUBCLASS 1.3.11
Subclass Accession number: 4472
Subclass: 1.3.11 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 16.4 +/- 16.8
Average RMSD (Å) : 0.467 +/- 0.121

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXXph
(φψ)-conformation: aalaa
Pattern: [CGILV]x[efhy][l][CDKR][aqr]x[DEG][ekqs][alw][EQRS][eknq][FKLV]
Conservation:-0.562-1.157-0.2091.968-0.154-0.391-1.0251.1690.087-1.2091.528-0.1420.095
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2z_A_391d2z   A4658CAHLDALDVWQQLHHHHHHHT-HHHHaaaaaaalaaaaa
1gzg_A_2121gzg   A212224GPFRDAVGSASNLHHHHHHHT-HHHHaaaaaaavaaaaa
1n4q_B_2201n4q   B227239IASLCLMGKLEEVHHHHHHHT-HHHHaaaaaaavaaaaa
1nk4_A_4401nk4   A462474LDELRRNEQDRLLHHHHHHTT-HHHHaaaaaaavaaaaa
1ntv_A_1481ntv   A161173IYELKQREELEKKHHHHHHTT-HHHHaaaaaaalaaaaa
1qqf_A_10131qqf   A10251037VHYLDQTEQWEKFHHHHHHHT-HHHHaaaaaaalaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID G - 212
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID P - 213
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID F - 214
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID R - 215
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID S - 220
1gzg_A_2121gzg   A     LAF5-FLUOROLEVULINIC ACID L - 224
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE G - 220
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE G - 221
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE S - 222
1n4q_B_2201n4q   B     MGM2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE C - 225
1qqf_A_10131qqf   A     CSOS-HYDROXYCYSTEINE Q - 1013
1qqf_A_10131qqf   A     CSOS-HYDROXYCYSTEINE N - 1014
1qqf_A_10131qqf   A     CSOS-HYDROXYCYSTEINE M - 1015
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gzg_A_2121gzg   A LA2LAF BINDING SITE FOR CHAIN AF - 214

Clusters included in this Subclass
CLUSTER: HH.2.137
CLUSTER: HH.3.235