Information on SUBCLASS 1.3.17 |
Subclass Accession number: 4478
Subclass: 1.3.17 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.4 +/- 15.8 Average RMSD (Å) : 0.733 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXcAX |
(φψ)-conformation: | aalaa |
Pattern: | [KN] | x | x | [NQT] | [AQ] | x | [GN] | [A] | x | [EGN] | x | [AL] |
Conservation: | 1.026 | -1.072 | -0.975 | -0.104 | 0.133 | -0.588 | 1.396 | 2.025 | -0.782 | -0.201 | -0.878 | 0.021 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k87_A_118 | 1k87 | A | 134 | 145 | KLRNQKNASGRA | HHHTTTTHHHHH | aaaaaavaaaaa |
1k8k_D_64 | 1k8k | D | 65 | 76 | KELQAHGADELL | HHHHTTTHHHHH | aaaaaavaaaaa |
1r88_A_76 | 1r88 | A | 76 | 87 | NWVTAGNAMNTL | HHHHTS-HHHHH | aaaaaalaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | A - 121 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | E - 122 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | A - 124 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | H - 125 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | N - 140 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | G - 143 |
1k87_A_118 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | R - 144 |
1k87_A_118 | 1k87 | A | LACLACTIC ACID | R - 144 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | R - 144 |
1k87_A_118 | 1k87 | A | GOLGLYCEROL | M - 147 |
Clusters included in this Subclass |
CLUSTER: HH.4.173 |