Information on SUBCLASS 1.3.3 |
Subclass Accession number: 2123
Subclass: 1.3.3 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 14.5 +/- 15.4 Average RMSD (Å) : 0.426 +/- 0.114 Consensus geometry
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Consensus Sequence: | XXchX |
(φψ)-conformation: | aalaa |
Pattern: | x | x | [afgilv] | x | [adegknqr] | x | [dgknq] | [afgkltv] | [iltvw] | [adegpqs] | x | [filmvw] |
Conservation: | -0.809 | -0.715 | 1.074 | -0.769 | -0.140 | -0.987 | 1.673 | -0.112 | 0.026 | -0.126 | -0.950 | 1.835 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1am7_A_88 | 1am7 | A | 97 | 108 | QQIKERGALPMI | HHHHHTT-HHHH | aaaaaavaaaaa |
1amf_*_124 | 1amf | - | 131 | 142 | EALQKLGAWDTL | HHHHHTT-HHHH | aaaaaavaaaaa |
1atg_*_117 | 1atg | - | 124 | 135 | QVLTHLGLLDKL | HHHHHTT-HHHH | aaaaaavaaaaa |
1b79_A_83 | 1b79 | A | 88 | 99 | ESLERQGQLDSV | HHHHTTTTHHHH | aaaaaavaaaaa |
1bu6_O_109 | 1bu6 | O | 113 | 124 | EHLKRDGLEDYI | HHHHHTTTHHHH | aaaaaavaaaaa |
1d2z_A_39 | 1d2z | A | 47 | 58 | AHLDALDVWQQL | HHHHHHT-HHHH | aaaaaalaaaaa |
1d4o_A_31 | 1d4o | A | 31 | 42 | YGLCAAKAQYPI | HHHHHTTTHHHH | aaaaaalaaaaa |
1ee4_A_123 | 1ee4 | A | 124 | 135 | DVVIQAGVVPRL | HHHHHTT-HHHH | aaaaaavaaaaa |
1ee4_A_205 | 1ee4 | A | 209 | 220 | DYVLQCNAMEPI | HHHHHTT-HHHH | aaaaaavaaaaa |
1ee4_A_373 | 1ee4 | A | 377 | 388 | QAVIDANLIPPL | HHHHHTT-HHHH | aaaaaalaaaaa |
1fye_A_90 | 1fye | A | 95 | 106 | KESRERGLLAPM | HHHHHTT-HHHH | aaaaaavaaaaa |
1hlw_A_17 | 1hlw | A | 17 | 28 | PDGVARGLVGEI | HHHHHTT-HHHH | aaaaaavaaaaa |
1io7_A_211 | 1io7 | A | 223 | 234 | IDFTRFNLWQRI | HHHHHTT-HHHH | aaaaaalaaaaa |
1j23_A_52 | 1j23 | A | 56 | 67 | IQSIIDGGLFDQ | HHHHHTT-HHHH | aaaaaavaaaaa |
1jdh_A_478 | 1jdh | A | 483 | 494 | NAVRLHYGLPVV | HHHHHTT-HHHH | aaaaaalaaaaa |
1jdh_A_584 | 1jdh | A | 588 | 599 | IVIRGLNTIPLF | HHHHHTT-HHHH | aaaaaalaaaaa |
1jdh_A_625 | 1jdh | A | 629 | 640 | EAIEAEGATAPL | HHHHHTT-HHHH | aaaaaavaaaaa |
1jr2_A_64 | 1jr2 | A | 72 | 83 | LCLEQNNKTEVW | HHHHHTT-HHHH | aaaaaavaaaaa |
1jvn_A_53 | 1jvn | A | 58 | 69 | DNLFNRGFEKPI | HHHHHTT-HHHH | aaaaaavaaaaa |
1k9v_F_354 | 1k9v | F | 359 | 370 | RRLRENDLIDFV | HHHHHTT-HHHH | aaaaaalaaaaa |
1oe4_A_262 | 1oe4 | A | 268 | 279 | GQLLELGVLSLL | HHHHHHT-HHHH | aaaaaavaaaaa |
1r0w_A_514 | 1r0w | A | 519 | 530 | SVVKACQLQQDI | HHHHHTT-HHHH | aaaaaavaaaaa |
1upa_A_225 | 1upa | A | 225 | 236 | AAAIRSGAVPAI | HHHHHTT-HHHH | aaaaaavaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1amf_*_124 | 1amf | * | MO4MOLYBDATE BINDING SITE. | A - 125 |
1atg_*_117 | 1atg | * | MOBANION-BINDING POCKET LOCATED AT THE INTERFACE BETWEEN THE 2 DOMAINS OF THE PROTEIN. BINDS BOTH MOLYBDATE AND TUNGSTATE. | Y - 118 |
Clusters included in this Subclass |
CLUSTER: HH.2.33 |
CLUSTER: HH.3.37 |
CLUSTER: HH.4.20 |