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Information on SUBCLASS 1.4.6
Subclass Accession number: 2146
Subclass: 1.4.6 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005509 (>75 %)  GO:0008194 (>75 %)  GO:0008378 (>75 %)  GO:0016757 (>75 %)  GO:0016758 (>75 %)  GO:0035250 (>75 %)  
SCOP : 53954 (>75 %)  53955 (>75 %)  53960 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 20.8 +/- 16.8
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXGXX
(φψ)-conformation: aaeaa
Pattern: [DT]x[CLY][CFL]xxx[G]x[RW][AL]x[DR]x[ALM][EK]
Conservation:0.502-0.950-0.295-0.213-0.786-1.113-0.2953.143-0.0620.264-0.026-0.6220.128-0.514-0.2131.050
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ixk_A_181ixk   A2237DRYFQLWGERAIRIAEHHHHHHHTTHHHHHHHaaaaaaaeaaaaaaaa
1pdu_A_4251pdu   A426441TQCLRSFGEWLNDIMEHHHHHHHTTHHHHHHHaaaaaaaeaaaaaaaa
1q6o_A_361q6o   A3651TILCVGEGVRAVRDLKHHHHHHH-THHHHHHHaaaaaaaeaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ixk_A_181ixk   A     MSESELENOMETHIONINE L - 19
1ixk_A_181ixk   A     MSESELENOMETHIONINE F - 20
1ixk_A_181ixk   A     MSESELENOMETHIONINE R - 23
1ixk_A_181ixk   A     MSESELENOMETHIONINE F - 25
1ixk_A_181ixk   A     MSESELENOMETHIONINE G - 29
1ixk_A_181ixk   A     MSESELENOMETHIONINE E - 30
1ixk_A_181ixk   A     MSESELENOMETHIONINE R - 31
1ixk_A_181ixk   A     MSESELENOMETHIONINE A - 32
1ixk_A_181ixk   A     MSESELENOMETHIONINE I - 33
1ixk_A_181ixk   A     MSESELENOMETHIONINE R - 34
1ixk_A_181ixk   A     MSESELENOMETHIONINE I - 35
1ixk_A_181ixk   A     MSESELENOMETHIONINE A - 36
1ixk_A_181ixk   A     MSESELENOMETHIONINE E - 37
1q6o_A_361q6o   A     MGMAGNESIUM ION T - 36
1q6o_A_361q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE T - 36
1q6o_A_361q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE I - 37

Clusters included in this Subclass
CLUSTER: HH.3.147