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Information on SUBCLASS 16.1.1
Subclass Accession number: 5163
Subclass: 16.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 74.6 +/- 18.7
Average RMSD (Å) : 0.283 +/- 0.111

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hVYPWTQRhFXSFGchSphX
(φψ)-conformation: aabaaaaaaaaaaepaabaa
Pattern: [aciv][g][agp][eq][at][l][ags][r][lv][l][iv][v][y][p][w][t][q][r][fhy][f][adegks][gs][f][g][dn][ilv][s][nst][anp][adgnst][a][iv][lm]
Conservation:-1.0910.975-1.129-1.201-0.6650.079-0.8960.527-0.5220.079-0.1390.0791.4221.4223.2130.5270.5270.527-0.2350.975-1.479-0.6260.9750.975-0.103-0.5430.079-0.758-1.263-1.4340.079-0.131-0.247
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4f_B_201a4f   B2355CGAEALARLLIVYPWTQRFFSSFGNLSSPTAILHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1ch4_A_201ch4   A2355VGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMHHHHHHHHHHHHSGGGGGGSGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1fhj_B_201fhj   B2355VGGEALGRLLIVYPWTQRFFDSFGDLSTPDAVMHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1g08_B_201g08   B2355VGGEALGRLLVVYPWTQRFFESFGDLSTADAVMHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1hbr_B_201hbr   B2355CGAEALARLLIVYPWTQRFFASFGNLSSPTAILHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1i3d_A_201i3d   A2355AGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1ird_B_2231ird   B223255VGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMHHHHHHHHHHHHSGGGGGG-GGG---SSHHHHHaaaaaaaaaaaabwaaaaaaaaaexaabaaaaa
1iwh_B_2201iwh   B223255VGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMHHHHHHHHHHHHSGGGGGG-GGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1jeb_B_201jeb   B2355VGGEALGRLLVVYPWTQRYFDSFGDLSSASAIMHHHHHHHHHHHHSGGGGGG-STT---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1out_B_201out   B2355IGPLALARVLIVYPWTQRYFGSFGNVSTPAAIMHHHHHHHHHHHHSGGGGGG-GGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1spg_B_201spg   B2355IGPQALSRLLIVYPWTQRHFKGFGNISTNAAILHHHHHHHHHHHHSGGGGGG-GGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
1v75_B_201v75   B2355VGGEALARLLIVYPWTQRFFASFGNLSSANAILHHHHHHHHHHHHSGGGGGGGGGG---SSHHHHHaaaaaaaaaaaabaaaaaaaaaaexaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a4f_B_201a4f   B     OXYOXYGEN MOLECULE L - 28
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 31
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE T - 38
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 41
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 42
1a4f_B_201a4f   B     OXYOXYGEN MOLECULE F - 42
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE S - 44
1a4f_B_201a4f   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 45
1ch4_A_201ch4   A     CMOCARBON MONOXIDE L - 28
1ch4_A_201ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 32
1ch4_A_201ch4   A     CMOCARBON MONOXIDE F - 42
1fhj_B_201fhj   B     HEMPROTOPORPHYRIN IX CONTAINING FE R - 40
1i3d_A_201i3d   A     CMOCARBON MONOXIDE L - 31
1ird_B_2231ird   B     CMOCARBON MONOXIDE L - 228
1ird_B_2231ird   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 231
1ird_B_2231ird   B     HEMPROTOPORPHYRIN IX CONTAINING FE T - 238
1ird_B_2231ird   B     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 239
1ird_B_2231ird   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 241
1ird_B_2231ird   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 242
1ird_B_2231ird   B     CMOCARBON MONOXIDE F - 242
1iwh_B_2201iwh   B     HEMPROTOPORPHYRIN IX CONTAINING FE S - 244
1iwh_B_2201iwh   B     HEMPROTOPORPHYRIN IX CONTAINING FE F - 245
1jeb_B_201jeb   B     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 39
1jeb_B_201jeb   B     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 41
1out_B_201out   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 28
1out_B_201out   B     HEMPROTOPORPHYRIN IX CONTAINING FE V - 31
1spg_B_201spg   B     HEMPROTOPORPHYRIN IX CONTAINING FE H - 41
1spg_B_201spg   B     HEMPROTOPORPHYRIN IX CONTAINING FE K - 43
1spg_B_201spg   B     HEMPROTOPORPHYRIN IX CONTAINING FE G - 44

Clusters included in this Subclass
CLUSTER: HH.15.1