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Information on SUBCLASS 2.1.1
Subclass Accession number: 8883
Subclass: 2.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 64

Average sequence ID (%) : 10.8 +/- 13.4
Average RMSD (Å) : 0.620 +/- 0.190

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhXXX
(φψ)-conformation: aappaa
Pattern: xxxxx[acfgiklmtv][dhknpqrst]xxxx
Conservation:-1.057-0.945-0.6900.0700.7200.7152.360-0.745-0.2420.281-0.466
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5t_*_2711a5t   -276286ELANHLSPSRLHHHHHS-HHHHaaaaabxaaaa
1a88_A_1771a88   A185195LQGMMGAANAHHHHHHS-HHHHaaaaaxxaaaa
1a8s_*_1751a8s   -183193LQGMAAGHKNAHHHHHS-HHHHaaaaaxxaaaa
1azs_A_4001azs   A402412SLASQCTAQELHHHHHS-HHHHaaaaabxaaaa
1c4k_A_911c4k   A102112YEDSILPPFFKHHHHHS-HHHHaaaaaxxaaaa
1ci0_A_1301ci0   A135145RYFKTRPRGSKHHHHHS-HHHHaaaaapwaaaa
1csn_*_2261csn   -235245EKKQSTPLRELHHHHHS-HHHHaaaaaxxaaaa
1cus_*_1211cus   -128138ASIEDLDSAIRHHHHHS-HHHHaaaaaxpaaaa
1d3g_A_421d3g   A4555TLQGLLDPESAHHHHHS-HHHHaaaaabxaaaa
1dci_A_2491dci   A261271ADISSKSPVAVHHHHHS-HHHHaaaaaxpaaaa
1di1_A_1011di1   A116126DVLEHMSFADGHHHHHS-HHHHaaaaabpaaaa
1doz_A_1511doz   A163173ETYASMPEDERHHHHHS-HHHHaaaaaxxaaaa
1e93_A_4201e93   A424434ALYELLSDDEHHHHHHS-HHHHaaaaaxxaaaa
1ea5_A_2591ea5   A264274HCLREKKPQELHHHHHS-HHHHaaaaaxxaaaa
1em9_A_1171em9   A119129GQAALLRPGELHHHHHS-HHHHaaaaaxxaaaa
1f76_A_31f76   A818KALFQLDPERAHHHTTS-HHHHaaaaaxxaaaa
1f7l_A_321f7l   A3646DQYYELSEKRKHHHTTS-HHHHaaaaaxxaaaa
1fth_A_10271fth   A10271037FAKRVLTALEMHHHHHS-HHHHaaaaabxaaaa
1fxx_A_2691fxx   A269279SPLLELDSDTLHHHHHS-HHHHaaaaaxxaaaa
1gox_*_81gox   -1222IAKQKLPKMVYHHHHHS-HHHHaaaaaxxaaaa
1gp6_A_891gp6   A100110EEFFSLSVEEKHHHHTS-HHHHaaaaaxxaaaa
1gpu_A_5911gpu   A592602FTFDKQPLEYRHHHHHS-HHHHaaaaaxxaaaa
1hzd_A_1431hzd   A144154KERAKMSSSEVHHHTTS-HHHHaaaaabxaaaa
1i7d_A_5521i7d   A556566ALFHSLPEMATHHHHHS-HHHHaaaaaxxaaaa
1ibv_B_2781ibv   B283293EIMENLTMPEWHHHHH--HHHHaaaaaxxaaaa
1j0h_A_3941j0h   A403413HVLHSYPNNVNHHHHTS-HHHHaaaaabxaaaa
1j7n_A_5921j7n   A605615EWKNNIQSDLIHHHHHS-HHHHaaaaabpaaaa
1j98_A_1341j98   A142152RFWLSQDKEELHHHHTS-HHHHaaaaaxxaaaa
1j99_A_641j99   A6474KWIQSVPIWERHHHHHS-HHHHaaaaabxaaaa
1ji1_A_4421ji1   A451461GTRANYPTNVQHHHTTS-HHHHaaaaabxaaaa
1jqk_A_1661jqk   A167177WLAASLTPRRVHHHHHS-HHHHaaaaabpaaaa
1k0i_A_2361k0i   A242252ELKARLPSEVAHHHHTS-HHHHaaaaabxaaaa
1k4t_A_2721k4t   A281291DWRKEMTNEEKHHHHHS-HHHHaaaaaxxaaaa
1k8t_A_5011k8t   A503513EIKKQIPQKEWHHHHHS-HHHHaaaaaxpaaaa
1k92_A_2941k92   A306316LLTGIHNEDTIHHHHHS-HHHHaaaaabxaaaa
1kae_A_701kae   A7585AASERLSDELKHHHHHS-HHHHaaaaaxxaaaa
1kg2_A_621kg2   A6373TDLANAPLDEVHHHHHS-HHHHaaaaaxxaaaa
1kiy_A_1261kiy   A137147NVLRHFGPFCSHHHTTS-HHHHaaaaabxaaaa
1ko7_A_551ko7   A5969SFYNLLPDEERHHHHHS-HHHHaaaaaxxaaaa
1kor_A_2731kor   A285295VESLTLDREVLHHHHHS-HHHHaaaaaxxaaaa
1mhy_G_541mhy   G6878LKTEKLPVADLHHHHHS-HHHHaaaaabxaaaa
1mty_G_531mty   G6777LKARAFNEVDFHHHHHS-HHHHaaaaaxxaaaa
1mx1_A_12791mx1   A12841294HCLRQKTEEELHHHHHS-HHHHaaaaaxxaaaa
1ngn_A_4621ngn   A463473EVARAADWRDVHHHHHS-HHHHaaaaaxxaaaa
1np3_A_2311np3   A245255NMNYSISNNAEHHHHHS-HHHHaaaaaxxaaaa
1nrg_A_1511nrg   A156166CYFHSRPKSSQHHHHHS-HHHHaaaaaxxaaaa
1nst_A_7231nst   A723733PVALKYTFHEVHHHHHS-HHHHaaaaabxaaaa
1o0w_A_231o0w   A2636LFRALCHSSYAHHHHHB-HHHHaaaaaxxaaaa
1ogs_A_871ogs   A91101LNILALSPPAQHHHTTS-HHHHaaaaaxxaaaa
1oja_A_3471oja   A350360RKLARLTKEERHHHTTS-HHHHaaaaaxxaaaa
1p4c_A_81p4c   A1424LAQKRLPKMVYHHHHHS-HHHHaaaaaxxaaaa
1p80_A_5061p80   A510520LFWLSQTPFEQHHHHHS-HHHHaaaaaxxaaaa
1pmn_A_2841pmn   A285295EFMKKLQPTVRHHHHTS-HHHHaaaaaxxaaaa
1psw_A_2251psw   A230240EILAALNTEQQHHHTTS-HHHHaaaaabxaaaa
1q16_C_1161q16   C117127RVRATTTGADIHHHHH--HHHHaaaaaxbaaaa
1qh4_A_61qh4   A919LLKMKYSVDDEHHHHHS-HHHHaaaaaxxaaaa
1qr0_A_1251qr0   A129139SDLLAKDKDEQHHHHHS-HHHHaaaaaxxaaaa
1rlr_*_1181rlr   -118128HLLEDYTEEEFHHHHHS-HHHHaaaaabxaaaa
1sur_*_131sur   -2535AELEKLDAEGRHHHTTS-HHHHaaaaaxxaaaa
1sur_*_51sur   -616NALNELPKVDRHHHHTS-HHHHaaaaaxxaaaa
2ahj_B_642ahj   B6575RHYMMTPYYERHHHHHS-HHHHaaaaaxxaaaa
2cb5_A_222cb5   A2939NVGTTHDLLDIHHHTTS-HHHHaaaaabxaaaa
2occ_H_542occ   H5969VYKSLCPISWVHHHHHS-HHHHaaaaaxxaaaa
3gcb_*_213gcb   -2838TVLKNYNADDAHHHTTS-HHHHaaaaabpaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a8s_*_1751a8s   *     PPIPROPANOIC ACID F - 181
1a8s_*_1751a8s   *     PPIPROPANOIC ACID F - 200
1ci0_A_1301ci0   A     FMNFLAVIN MONONUCLEOTIDE R - 140
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID L - 42
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE L - 42
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID M - 43
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID L - 46
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE L - 46
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID Q - 47
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID L - 50
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID D - 51
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID P - 52
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID E - 53
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID A - 55
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE A - 55
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID H - 56
1d3g_A_421d3g   A     FMNFLAVIN MONONUCLEOTIDE H - 56
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID L - 58
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE L - 58
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID A - 59
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE A - 59
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID V - 60
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID F - 62
1d3g_A_421d3g   A     DDQDECYLAMINE-N,N-DIMETHYL-N-OXIDE F - 62
1d3g_A_421d3g   A     BRE2-BIPHENYL-4-YL-6-FLUORO-3-METHYL-QUINOLINE-4-CARBOXYLIC ACID T - 63
1dci_A_2491dci   A     EDO1,2-ETHANEDIOL K - 275
1dci_A_2491dci   A     EDO1,2-ETHANEDIOL L - 278
1dci_A_2491dci   A     EDO1,2-ETHANEDIOL I - 279
1dci_A_2491dci   A     EDO1,2-ETHANEDIOL R - 282
1f76_A_31f76   A     MSESELENOMETHIONINE Y - 3
1f76_A_31f76   A     OROOROTIC ACID Y - 3
1f76_A_31f76   A     MSESELENOMETHIONINE P - 4
1f76_A_31f76   A     MSESELENOMETHIONINE F - 5
1f76_A_31f76   A     MSESELENOMETHIONINE V - 6
1f76_A_31f76   A     OROOROTIC ACID V - 6
1f76_A_31f76   A     MSESELENOMETHIONINE E - 16
1f76_A_31f76   A     MSESELENOMETHIONINE H - 19
1f76_A_31f76   A     MSESELENOMETHIONINE L - 26
1f7l_A_321f7l   A     COACOENZYME A E - 48
1f7l_A_321f7l   A     COACOENZYME A F - 49
1f7l_A_321f7l   A     COACOENZYME A G - 52
1f7l_A_321f7l   A     COACOENZYME A R - 53
1f7l_A_321f7l   A     CACALCIUM ION F - 54
1f7l_A_321f7l   A     CACALCIUM ION E - 58
1f7l_A_321f7l   A     CACALCIUM ION K - 62
1gox_*_81gox   *     FMNFLAVIN MONONUCLEOTIDE Y - 24
1gox_*_81gox   *     FMNFLAVIN MONONUCLEOTIDE Y - 25
1gox_*_81gox   *     FMNFLAVIN MONONUCLEOTIDE A - 26
1j99_A_641j99   A     HGIMERCURY (II) IODIDE W - 65
1j99_A_641j99   A     HGIMERCURY (II) IODIDE I - 66
1j99_A_641j99   A     HGIMERCURY (II) IODIDE V - 69
1j99_A_641j99   A     AND3-BETA-HYDROXY-5-ANDROSTEN-17-ONE I - 71
1j99_A_641j99   A     AND3-BETA-HYDROXY-5-ANDROSTEN-17-ONE W - 72
1j99_A_641j99   A     HGIMERCURY (II) IODIDE R - 74
1kae_A_701kae   A     MSESELENOMETHIONINE L - 80
1kae_A_701kae   A     MSESELENOMETHIONINE E - 83
1kae_A_701kae   A     MSESELENOMETHIONINE L - 84
1kae_A_701kae   A     MSESELENOMETHIONINE K - 85
1kae_A_701kae   A     MSESELENOMETHIONINE Q - 86
1kg2_A_621kg2   A     GOLGLYCEROL V - 62
1kg2_A_621kg2   A     GOLGLYCEROL T - 63
1kg2_A_621kg2   A     GOLGLYCEROL D - 64
1kg2_A_621kg2   A     GOLGLYCEROL L - 65
1kg2_A_621kg2   A     GOLGLYCEROL N - 67
1kg2_A_621kg2   A     GOLGLYCEROL A - 68
1kg2_A_621kg2   A     GOLGLYCEROL P - 69
1kg2_A_621kg2   A     GOLGLYCEROL E - 72
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL P - 126
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 127
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 128
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 130
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL V - 131
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL N - 132
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL F - 135
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL I - 151
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL T - 154
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 155
1ko7_A_551ko7   A     PO4PHOSPHATE ION T - 55
1ko7_A_551ko7   A     PO4PHOSPHATE ION T - 56
1ko7_A_551ko7   A     PO4PHOSPHATE ION E - 57
1kor_A_2731kor   A     ARGARGININE Y - 310
1nrg_A_1511nrg   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 157
1nrg_A_1511nrg   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 161
1nrg_A_1511nrg   A     PLPPYRIDOXAL-5'-PHOSPHATE P - 162
1nrg_A_1511nrg   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 165
1p4c_A_81p4c   A     FMNFLAVIN MONONUCLEOTIDE Y - 26
1p4c_A_81p4c   A     FMNFLAVIN MONONUCLEOTIDE L - 27
1p4c_A_81p4c   A     FMNFLAVIN MONONUCLEOTIDE E - 28
1qr0_A_1251qr0   A     MGMAGNESIUM ION W - 147
1qr0_A_1251qr0   A     COACOENZYME A W - 147
1qr0_A_1251qr0   A     MGMAGNESIUM ION E - 151
1qr0_A_1251qr0   A     COACOENZYME A E - 151
1qr0_A_1251qr0   A     COACOENZYME A I - 154
1qr0_A_1251qr0   A     MGMAGNESIUM ION K - 155
1qr0_A_1251qr0   A     COACOENZYME A K - 155
1qr0_A_1251qr0   A     COACOENZYME A Q - 156
2ahj_B_642ahj   B     CSD3-SULFINOALANINE Y - 67
2ahj_B_642ahj   B     CSD3-SULFINOALANINE Y - 72
2ahj_B_642ahj   B     NONITROGEN OXIDE Y - 72
2ahj_B_642ahj   B     DIO1,4-DIETHYLENE DIOXIDE Y - 72
2ahj_B_642ahj   B     CSD3-SULFINOALANINE R - 75
2ahj_B_642ahj   B     CSD3-SULFINOALANINE Y - 76
2ahj_B_642ahj   B     FEFE (III) ION Y - 76
2ahj_B_642ahj   B     NONITROGEN OXIDE Y - 76
2ahj_B_642ahj   B     DIO1,4-DIETHYLENE DIOXIDE Y - 76

Clusters included in this Subclass
CLUSTER: HH.1.4
CLUSTER: HH.1.82
CLUSTER: HH.2.127
CLUSTER: HH.2.175
CLUSTER: HH.2.21
CLUSTER: HH.3.12
CLUSTER: HH.3.121
CLUSTER: HH.3.21
CLUSTER: HH.3.70
CLUSTER: HH.4.33
CLUSTER: HH.5.18