Logo
Information on SUBCLASS 2.1.11
Subclass Accession number: 8893
Subclass: 2.1.11 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 11.9 +/- 20.7
Average RMSD (Å) : 0.677 +/- 0.239

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXhpXX
(φψ)-conformation: aappaa
Pattern: x[ilmtv][ailvw][adknqrs][agnsv][flmvw][ADNST][agilmp][adek]x[afglvy]
Conservation:-1.1520.667-0.9190.433-0.0900.9022.104-0.9910.306-0.830-0.429
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0q_A_71d0q   A1222AIRRGVDIVDVHHHHH--HHHHaaaaabbaaaa
1din_*_781din   -8696KLWQAFDMEAGHHHHT--HHHHaaaaaxxaaaa
1f0k_A_3121f0k   A317327NTLAGWSRETLHHHHT--HHHHaaaaabxaaaa
1g71_A_3121g71   A313323REVMKFNPFRHHHHHH--HHHHaaaaaxbaaaa
1kew_A_3381kew   A340350WVNNVKSGAYQHHHHS--HHHHaaaaabxaaaa
1l0l_B_3951l0l   B400410QQIDAVADADVHHHHT--HHHHaaaaaxxaaaa
1m15_A_261m15   A2636LLKKHLTKDVFHHHHH--HHHHaaaaaxxaaaa
1m6j_A_181m6j   A2737GVAASVDAELAHHHHH--HHHHaaaaabxaaaa
1n16_A_291n16   A2939HMAKALTLDIYHHHHH--HHHHaaaaaxbaaaa
1oja_A_1401oja   A141151EEWDNMTMKELHHHHTSBHHHHaaaaabxaaaa
1qh4_A_291qh4   A2939HMAKVLTLDLYHHHHH--HHHHaaaaaxbaaaa
1qk1_A_241qk1   A2434CMASHLTPAVYHHHHH--HHHHaaaaaxbaaaa
2crk_A_292crk   A2939HMAKVLTPDLYHHHHH--HHHHaaaaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1din_*_781din   *     CSD3-SULFINOALANINE W - 88
1kew_A_3381kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE N - 356
1kew_A_3381kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE Y - 357
1qh4_A_291qh4   A     ACTACETATE ION H - 29

Clusters included in this Subclass
CLUSTER: HH.1.67
CLUSTER: HH.2.177
CLUSTER: HH.2.35