Information on SUBCLASS 2.1.12 |
Subclass Accession number: 4512
Subclass: 2.1.12 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 10.9 +/- 13.3 Average RMSD (Å) : 0.560 +/- 0.217 Consensus geometry
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Consensus Sequence: | XphXXp |
(φψ)-conformation: | aappaa |
Pattern: | [ADEGKQ] | x | [ily] | x | [dknrsty] | [afgklv] | [adgpt] | [ADENPS] | [dehkps] | x | x |
Conservation: | 0.352 | -0.245 | 1.755 | -1.707 | -0.591 | -0.905 | -0.337 | 1.372 | 0.613 | -0.496 | 0.188 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_59 | 1afw | A | 69 | 79 | EFIGRFPEPLR | HHHHTS-HHHH | aaaaaxxaaaa |
1cex_*_121 | 1cex | - | 128 | 138 | ASIEDLDSAIR | HHHHHS-HHHH | aaaaaxpaaaa |
1cy5_A_49 | 1cy5 | A | 58 | 68 | KMILKKDNDSY | HHHHTS-HHHH | aaaaaxxaaaa |
1esw_A_399 | 1esw | A | 401 | 411 | GWYRTATPHEK | HHHHHS-HHHH | aaaaaxxaaaa |
1iap_A_73 | 1iap | A | 82 | 92 | DMLGSLGPKEA | HHHTTS-HHHH | aaaaabxaaaa |
1k04_A_950 | 1k04 | A | 970 | 980 | ETIPLLPASTH | HHGGGS-HHHH | aaaaabpaaaa |
1q1s_C_307 | 1q1s | C | 318 | 328 | GNIVTGTDEQT | HHHTTS-HHHH | aaaaaxxaaaa |
1r3c_A_184 | 1r3c | A | 184 | 194 | ATRWYRAPEIM | HHHHTS-HHHH | aaaaaxxaaaa |
1uby_*_283 | 1uby | - | 287 | 297 | QCLQRVTPEQR | HHHHH--HHHH | aaaaaxbaaaa |
2fok_A_197 | 2fok | A | 202 | 212 | DTLANAMPKDK | HHHHTS-HHHH | aaaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | Q - 50 |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | A - 54 |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | S - 70 |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | N - 73 |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | A - 74 |
1cy5_A_49 | 1cy5 | A | ZNZINC ION | H - 77 |
Clusters included in this Subclass |
CLUSTER: HH.2.183 |
CLUSTER: HH.3.129 |
CLUSTER: HH.4.95 |