Information on SUBCLASS 2.1.20 |
Subclass Accession number: 4520
Subclass: 2.1.20 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 8.8 +/- 11.0 Average RMSD (Å) : 0.650 +/- 0.122 Consensus geometry
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Consensus Sequence: | XXhpXX |
(φψ)-conformation: | aappaa |
Pattern: | x | [EGKNQ] | [afgvy] | [afiv] | [krst] | [aenst] | [FLY] | [EQRS] | [ekq] | x | [fgkl] | [pqr] | x | [FGLM] | [DHNSY] | [dknp] | x | [EQST] | [ailv] |
Conservation: | -1.017 | 0.586 | -1.218 | -0.053 | -0.096 | -0.635 | 2.226 | 1.572 | 0.757 | -1.218 | -1.185 | 0.851 | -1.036 | 0.064 | 0.376 | -0.553 | -0.620 | 1.089 | 0.111 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aua_*_219 | 1aua | - | 219 | 237 | FGFSTAFRLFKPFLDPVTV | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1b3u_A_533 | 1b3u | A | 537 | 555 | FNVAKSLQKIGPILDNSTL | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1giq_A_46 | 1giq | A | 46 | 64 | SEQISNYSQTRQYFYDYQI | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1hs6_A_581 | 1hs6 | A | 582 | 600 | DQAVRTYQEHKASMHPVTA | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1ih7_A_757 | 1ih7 | A | 761 | 779 | QEYFKEFEKEFRQLNYISI | HHHHHHHHHHGGGS-HHHH | aaaaaaaaaaaaaxxaaaa |
1nzn_A_51 | 1nzn | A | 55 | 73 | RKGIVLLEELLPKGSKEEQ | HHHHHHHHHHTTTS-HHHH | aaaaaaaaaaaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aua_*_219 | 1aua | * | BOGB-OCTYLGLUCOSIDE | F - 221 |
1aua_*_219 | 1aua | * | BOGB-OCTYLGLUCOSIDE | T - 236 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | N - 51 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | D - 52 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | D - 53 |
1nzn_A_51 | 1nzn | A | GOLGLYCEROL | R - 55 |
Clusters included in this Subclass |
CLUSTER: HH.4.222 |
CLUSTER: HH.5.95 |
CLUSTER: HH.6.92 |