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Information on SUBCLASS 2.1.25
Subclass Accession number: 4525
Subclass: 2.1.25 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 9.5 +/- 10.3
Average RMSD (Å) : 0.640 +/- 0.230

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXhXXX
(φψ)-conformation: aappaa
Pattern: [fglt][EPQS]xx[rsy][KPT]x[ACLV][AGPS][KPRS][ADEP]x[KRY][AEKR][efl][AILMY][DEGKR]x[ALY]
Conservation:-2.0421.130-0.698-1.375-0.5731.174-1.3380.5700.5440.5830.635-0.3391.8420.457-0.2160.006-0.058-1.0180.716
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b3u_A_1501b3u   A150168FSVCYPRVSSAVKAELRQYHHHHTTTS-HHHHHHHHHHaaaaaaaxpaaaaaaaaaa
1cjc_A_2311cjc   A231249LQDRIKEAARPRKRLMELLHHHHTTTS-HHHHHHHHHHaaaaaaaxxaaaaaaaaaa
1l3l_A_871l3l   A87105GEHERPTLSKDERAFYDHAHHHHTTT--HHHHHHHHHHaaaaaaaxxaaaaaaaaaa
1qj4_A_1501qj4   A154172RENLYTLCGPEEYELAKMLHHHTSTTS-HHHHHHHHHHaaaaaaaxxaaaaaaaaaa
1r5p_A_621r5p   A6280TPTLSKILPPPVRKIIGDLHHHHGGGS-HHHHHHHHHHaaaaaaaxpaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l3l_A_871l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE F - 101
1l3l_A_871l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE Y - 102
1l3l_A_871l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE A - 105
1qj4_A_1501qj4   A     GOLGLYCEROL L - 157

Clusters included in this Subclass
CLUSTER: HH.4.196
CLUSTER: HH.6.267