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Information on SUBCLASS 2.1.29
Subclass Accession number: 4529
Subclass: 2.1.29 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.2 +/- 12.1
Average RMSD (Å) : 0.650 +/- 0.238

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpXphX
(φψ)-conformation: aappaa
Pattern: [DEKY]xxxxx[ILMV]xx[KLM][QST]xx[AE]x
Conservation:-0.211-0.895-0.314-1.275-0.804-1.1231.612-0.439-0.1350.5770.880-0.145-0.7432.0001.016
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kgn_A_1891kgn   A211225YKYQQGVKKLSEAEQHHHHHHHTTS-HHHHaaaaaaaaabxaaaa
1knx_A_581knx   A5872KREFGFLSQKTLVEQHHHHHHHTTS-HHHHaaaaaaaaNxxaaaa
1n69_A_431n69   A5670EIAIQMMMHMQPKEIHHHHHHHTTS-HHHHaaaaaaaaabxaaaa
1ogs_A_871ogs   A87101DAAALNILALSPPAQHHHHHHHTTS-HHHHaaaaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kgn_A_1891kgn   A     FEFE (III) ION I - 198
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED I - 198
1kgn_A_1891kgn   A     FEFE (III) ION D - 201
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED D - 201
1kgn_A_1891kgn   A     FEFE (III) ION E - 202
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED E - 202
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED S - 203
1kgn_A_1891kgn   A     FEFE (III) ION H - 205
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED H - 205
1kgn_A_1891kgn   A     FEFE (III) ION G - 206
1kgn_A_1891kgn   A     OF3FERRIC ION, 1 WATER COORDINATED G - 206
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE M - 43
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE A - 44
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE I - 46
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE C - 47
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE Y - 50
1n69_A_431n69   A     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE I - 51

Clusters included in this Subclass
CLUSTER: HH.5.142