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Information on SUBCLASS 2.1.38
Subclass Accession number: 2197
Subclass: 2.1.38 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004601 (>75 %)  GO:0016684 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 6.7 +/- 13.1
Average RMSD (Å) : 0.633 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXXXX
(φψ)-conformation: aappaa
Pattern: [DKQ][EFM][CTW]x[AEN]x[PS]xx[DEQ]xxx[CFI][IL]
Conservation:0.551-0.8820.408-1.168-0.452-0.5950.954-0.209-1.0251.697-0.595-0.595-0.4520.1212.240
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jil_A_2491jil   A254268QFWINQSDEDVIKFLHHHHT--HHHHHHHHaaaaaxxaaaaaaaa
1n5u_A_2761n5u   A276290KECCEKPLLEKSHCIHHHHSS-HHHHHHHHaaaaaxxaaaaaaaa
1q7c_A_1871q7c   A187201DMTRALSDDQRAGILHHHHTS-HHHHHHHHaaaaaxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1n5u_A_2761n5u   A     MYRMYRISTIC ACID L - 283
1n5u_A_2761n5u   A     MYRMYRISTIC ACID L - 284
1n5u_A_2761n5u   A     MYRMYRISTIC ACID E - 285
1n5u_A_2761n5u   A     MYRMYRISTIC ACID K - 286
1n5u_A_2761n5u   A     MYRMYRISTIC ACID S - 287
1n5u_A_2761n5u   A     MYRMYRISTIC ACID H - 288
1q7c_A_1871q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 188

Clusters included in this Subclass
CLUSTER: HH.2.209