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Information on SUBCLASS 2.1.39
Subclass Accession number: 4539
Subclass: 2.1.39 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 13.0 +/- 13.3
Average RMSD (Å) : 0.725 +/- 0.330

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: XXhcXX
(φψ)-conformation: aappaa
Pattern: [IKTV][ER][ALVY]x[ASTV]x[AILV]xx[AR][FLV][DN]xxx[FIM][AGVY][HN]
Conservation:-0.4931.025-0.443-0.914-0.139-1.0500.215-1.2020.2180.4110.4541.834-0.696-0.797-0.5550.568-0.8472.410
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jet_A_2871jet   A287304VRVRTALKLALDRDIIVNHHHHHHHHHHS-HHHHHHaaaaaaaaaaxxaaaaaa
1mkm_A_631mkm   A6582IEYGSFVLRRFNIRDIAHHHHHHHHHHH--HHHHHHaaaaaaaaaaxbaaaaaa
1rh1_A_3861rh1   A389406KEAIVNAWKAFNAEDMGNHHHHHHHHHH--HHHHHHaaaaaaaaaapxaaaaaa
3lyn_A_823lyn   A86103TRLGAEIGRRVDMVFFYNHHHHHHHHHHS-HHHHHHaaaaaaaaaaxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mkm_A_631mkm   A     FMTFORMIC ACID L - 64
1mkm_A_631mkm   A     FMTFORMIC ACID I - 65
1mkm_A_631mkm   A     FMTFORMIC ACID Y - 67
1mkm_A_631mkm   A     FMTFORMIC ACID G - 68
1mkm_A_631mkm   A     FMTFORMIC ACID S - 69
1mkm_A_631mkm   A     FMTFORMIC ACID L - 72

Clusters included in this Subclass
CLUSTER: HH.3.144