ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.1.40

Subclass Accession number: 4540
Subclass: 2.1.40

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 70.4 +/- -21.5
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XTGSEp
(φψ)-conformation:	aappaa

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	-1.038	0.355	0.862	2.382	-0.658	-0.658	-0.151	-0.151	-0.911	-1.545	-0.151	-1.291	1.369	-1.671	-0.911	-0.911	0.355	0.862	-0.151	0.355	-0.785	-0.151	-0.405	-0.151	-0.151	1.369	0.862	0.355	-0.405	-0.531	-0.151	-0.658	0.609	2.382	-0.405	1.875

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ed1_A_54	1ed1	A	54	89	KEGCQKILSVLAPLVPTGSENLKSLYNTVCVIWCIH	HHHHHHHHHHHGGGGGG--HHHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
1hiw_A_54	1hiw	A	54	89	SEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVH	HHHHHHHHHHHGGGGTT--HHHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
1hiw_S_54	1hiw	S	54	89	SEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVH	HHHHHHHHHHHGGGSTT--HHHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass